Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0089 ATGGCGGAGAAGTCTTGCATCAAGCGCCTTCAGAAGGAATATAGAGCCCTTTGTAAAGAGCCAGTGTCCCATGTTGTGGCTCGCCCTTCACCAAATGACATTCTTGAATGGCATTATGTGTTGGAAGGAAGTGAAGGAACACCTTTTGCAGGTGGATATTACTATGGAAAGATCAAGTTTCCTCCTGAATACCCGTATAAACCTCCTGGAATCAGCATGACTACACCTAATGGACGGTTCATGACACAGAAGAAGATTTGTTTGTCTATGAGTGATTTTCATCCTGAAAGTTGGAATCCTATGTGGTCTGTGTCCAGCATTCTTACGGGGCTTCTTTCATTCATGATGGACAACAGTCCAACCACCGGCAGCGTAACCACCACTATTGCCGAGAAGCAGCGTTTAGCTAAATCTTCCCTTTCTTTCAATTGTAAGAACGCGACATTCAGGAAAATGTTCCCGGAGTATGTGGAAAAGTACAACCAGCAGCAGCAGCTTCCCGAGCAAGTTGTTCCTGAGAGCGTGTCAACGGAGGTGTCTCATGATGACAACAAGAGTTCTAGGCCTGTATTGGAGAAGAATTCGGATTCTACAGGAGAAGGGATGCAGAGAGTAGAAGGGTTGAAGGATGTGAGGAAAAACAGAAAGCAACCATTTCCAACATGGATGATGTTATTACTCTTCTCCATCTTTGGGGTTGTAATGGCATTACCTTTGCTTCAGCTGGTCATTCTGCTTGAGTTTCAGTTCTACTATCTCAAGGTTTTTGGTTTTTGTTTGATAATGATGAAGAATTCTCAAGCACATCCACAATATGAAGCAAGTCACTATGATGGCTATGGATTCGATCTTCATGAGGACTTTTCCTTGTTCTTAGAAGAAGCAAAGCAAGCAAAGATGAAGAATTCATCGGTGCACCCGGAAGGATCTGCAGGACAAGAAGACAAAGGGAAGAATAGAAAGAAATCATGGAGAAGTTCTTTGGTTTCATGGTGGAAATCTGAGAAGAAAAACAAGCCAAGAGAAGAAGAAGAACACACCAAAGATAATTCTCAATCAAGGAAAAGGCATGGCCAAGTTTCTGGTCCAATATATAATAAGCAATGGACTTCAACATCTGGTCCTCTAACAACTCTGTTCAAACCAACAAAGAAAAAAGAGAGTGAGGTTGTTCCTTATATGTATCTTCACCAACAGAACAGAAATCATGTTTTGCAGAACTATGGTCCCCTTTATGTGGTTACTTGA 1248 0.4207 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVTTTIAEKQRLAKSSLSFNCKNATFRKMFPEYVEKYNQQQQLPEQVVPESVSTEVSHDDNKSSRPVLEKNSDSTGEGMQRVEGLKDVRKNRKQPFPTWMMLLLFSIFGVVMALPLLQLVILLEFQFYYLKVFGFCLIMMKNSQAHPQYEASHYDGYGFDLHEDFSLFLEEAKQAKMKNSSVHPEGSAGQEDKGKNRKKSWRSSLVSWWKSEKKNKPREEEEHTKDNSQSRKRHGQVSGPIYNKQWTSTSGPLTTLFKPTKKKESEVVPYMYLHQQNRNHVLQNYGPLYVVT* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0089 415 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 242 - -
Aev02g0089 415 CDD UBCc 7 157 IPR000608 -
Aev02g0089 415 Gene3D Ubiquitin Conjugating Enzyme 1 176 IPR016135 -
Aev02g0089 415 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 34-LIKE 3 242 - -
Aev02g0089 415 MobiDBLite consensus disorder prediction 332 355 - -
Aev02g0089 415 Pfam Ubiquitin-conjugating enzyme 9 123 IPR000608 -
Aev02g0089 415 SUPERFAMILY UBC-like 6 156 IPR016135 -
Aev02g0089 415 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Aev02g0089 415 MobiDBLite consensus disorder prediction 167 204 - -
Aev02g0089 415 MobiDBLite consensus disorder prediction 300 369 - -
Aev02g0089 415 SMART ubc_7 8 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0089 Aev-Chr2 524231 529018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0089 1 242 Miscellaneous Gene Families AT1G17280 75.510 5.79e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0089 K04554 - gmx:100778181 434.876