Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0034 ATGTGGTCGTCGTTGTTGTTCATCCTTCTGCTTGTGACATCATGGCATTATTATTCAGACTCCATTATTGTGGTCTCCTCAAGTAGAACTAGTAGTAGTAGGATGATGAAAGAGGACACAAAAATATCAGTAAGAGAGGGCGACGACGACACGATGAGCCATGCAAGGAGAGGCAGCAAGGTGGCAGGCCTATCACAATTCAAGAGATACCTATCACGATTCGGTTACCTCCAGCTTGTGCATGACGACGATGAGTTTGACGGCATGTTTGAGTCGGCTCTGATGAGATACCAACGCAGACTTGGGCTGCAAGTCACCGGCAGGCTCGACTCCAACACGCTCTCTCAGATGGCCACACCAAGATGCGGCCTTCCGGACCACGTGCCCTCCTCCACGGGCCTCCAGCACTTCGTCTACTTCCCAGGGAAGCCACGCTGGTCACGCGCGCCCGCGCCCATGACACTAACCTACGCATTCTCCCCGGACCACATGATCCACCGCACCACCTTGACCATGCCTCGCATAAGGACAGCCTTCCAGCGCGCCTTCTCAAGATGGGCTAAGGTCATTCCCGTCAACTTCGTGGAGTCTCGCGGCGATTACGGCTTTGCGGACATCAAGATCGGCTTCTACAGCGGCGACCACGGCGACGGGGAGCCTTTTGACGGGGTGCTTGGCGTGCTGGCCCATTCCTTCTCGCCGGAGAGCGGGCGGCTGCACCTGGACGCGGCGGAGACGTGGGCGGTGGACTTCGGAGAGACGGAGTCGGAGGTGGCGGTGGATTTGGAGTCGGTGGCGACGCATGAGATAGGGCACGTGTTGGGGCTGTCGCACAGCTGTGATAAGGAGGCGGTGATGTATCCGAGTCTGAGGCCGAGAGACAGGAGGGCGGATTTGAACATGGATGACATTAGAGGAGTGCAGTCTCTGTATGGCTCCAATCCCAATTTCACGACTCATCATCTTCAATCCGATATCTCCGCAAATGGAGCCACTCGGGCGGGAAGGAGGATGCTATGGTGGTGGTTCTATATCGGAGCAGAGGTAGTGGAGCGGCTGTATGGCATCTCTTTCCTCCGTGAGAAGCTTCGTCGTGTTGCTGTGGTTAGCTCATCACCATCGTTCGAATTCCTCGCCTCGCTGCAATTTGCTGTCGTGGTTGCCGCCACTAAGATCAAGATCGTATTTTCCCCTTCATGTTCCTCAGATCACATGAGGCTGTAG 1224 0.5572 MWSSLLFILLLVTSWHYYSDSIIVVSSSRTSSSRMMKEDTKISVREGDDDTMSHARRGSKVAGLSQFKRYLSRFGYLQLVHDDDEFDGMFESALMRYQRRLGLQVTGRLDSNTLSQMATPRCGLPDHVPSSTGLQHFVYFPGKPRWSRAPAPMTLTYAFSPDHMIHRTTLTMPRIRTAFQRAFSRWAKVIPVNFVESRGDYGFADIKIGFYSGDHGDGEPFDGVLGVLAHSFSPESGRLHLDAAETWAVDFGETESEVAVDLESVATHEIGHVLGLSHSCDKEAVMYPSLRPRDRRADLNMDDIRGVQSLYGSNPNFTTHHLQSDISANGATRAGRRMLWWWFYIGAEVVERLYGISFLREKLRRVAVVSSSPSFEFLASLQFAVVVAATKIKIVFSPSCSSDHMRL* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0034 407 SUPERFAMILY PGBD-like 56 127 IPR036365 -
Aev02g0034 407 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 138 315 - -
Aev02g0034 407 CDD ZnMc_MMP 145 312 IPR033739 GO:0008237|GO:0008270
Aev02g0034 407 Pfam Putative peptidoglycan binding domain 65 117 IPR002477 -
Aev02g0034 407 MobiDBLite consensus disorder prediction 36 55 - -
Aev02g0034 407 SMART col_5 142 313 IPR006026 GO:0006508|GO:0008237|GO:0008270
Aev02g0034 407 Gene3D Collagenase (Catalytic Domain) 55 318 IPR024079 GO:0008237
Aev02g0034 407 PANTHER METALLOENDOPROTEINASE 4-MMP 34 344 - -
Aev02g0034 407 Pfam Matrixin 154 312 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Aev02g0034 407 PANTHER MATRIX METALLOPROTEINASE 34 344 - -
Aev02g0034 407 PRINTS Matrixin signature 179 194 IPR021190 GO:0004222|GO:0006508|GO:0008270
Aev02g0034 407 PRINTS Matrixin signature 117 130 IPR021190 GO:0004222|GO:0006508|GO:0008270
Aev02g0034 407 PRINTS Matrixin signature 299 312 IPR021190 GO:0004222|GO:0006508|GO:0008270
Aev02g0034 407 PRINTS Matrixin signature 265 290 IPR021190 GO:0004222|GO:0006508|GO:0008270
Aev02g0034 407 PRINTS Matrixin signature 204 232 IPR021190 GO:0004222|GO:0006508|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0034 Aev-Chr2 198191 200418 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0034 - K07999 gmx:100781237 404.445