Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0028 ATGAGGATAAAGCTGAGTTTTTTGTGGATTTTGCTGCTATGTGGGTCTCGCTGTCAGGGGAGGTTTGTGGTGGAGAAGAACAATTTGAAGATCACTTCTCCAAAGTCACTGAGAGGTATATATGAATGTGCAATTGGCAACTTTGGGGTCCCAAAATATGGAGGAGCCATGATTGGCGCTGTGGTGTACCCGAAGGTGAATCAGAACGGATGTAGCAGATTTGAAGGTGCTGATAGTTTGTTTAGTTCCAAGCCTGGAGGATTCCCCACCTTTGTTCTTGTTGATCGGGGAGATTGCTTCTTCACCTTAAAGGCACGGAATGCACAGAATGGTGGAGCAGCAGCTATTCTTGTTGCAGATGACAGGGTGGAGCCATTGATCACCATGGACACTCCTGAAGAAGGGAATGGTGCCAATGGTGATGATTATGTTGAGAAGATCAGCATTCCTTCTGCCCTTATCAGCAAAGGACTCGGGGACAGCATCAAGAATTCCCTCTCAAATGGGGAGATGGTGAATGTAAACCTTGACTGGAGAGAGTCTCTTCCACATCCTGATGATAGAGTTGAGTATGAGTTTTGGACAAATAGCAATGATGAGTGTGGACCAAAGTGTGAAAGCCAAATCAGCTTTGTTACCACTTTCAAAGGTGCAGCCCAGCTACTTGAGAAGAAAGGGTTCACTCACTTCACCCCTCACTACATAACTTGGTACTGCCCAGAAGCATTTATCTTGAGCAAACAGTGCAAGGCTCAGTGCATAAACAATGGGAGGTACTGCGCGCCAGATCCTGAGCAGGATTTCTCTAGAGGCTATGATGGCAGAGATGTTGTCATTCAGAACTTGCGTCAAGCTTGCTTCTTCAAAGTGGCAAATGAAAGTGGCGAGCCTTGGAAATGGTGGGACTATTTCACCGACTTCTCTATCCGCTGCCCAATGAGAGAAAATAGGTACAATGACGAATGCTCAGATCAAGTTATCAAATCTCTAGGTTTTGATGTGAAGAGGATTAAAGATTGCGTAGGGGATCCTAATGCAGATGTTGAAAACCCTGTTCTTAAGGCCGAACAGGATGCACAGATCGGCAAAGATTCTCGTGGTGATGTTACTATACTACCTACTCTCATCATAAACAACAGACAGTACAGAGGTAAGTTGTCAAGAGCAGCAGTACTCAAGGCAATCTGCTCAGCTTTCAAAGAGACCACTGAGCCATCAATTTGTTTGACACCAGACATGGAAACAAACGAGTGTCTGGTAAACAATGGTGGCTGTTGGCAGGACAAATCTACCAACATTACAGCATGCAGGGACACTTTCCGAGGAAGAGTATGTGAATGCCCTATTGTACAAAATGTAAAGTTTGTTGGTGATGGATACACACATTGTGAAGCTACGGCAGCATTGAGGTGTGCAGTCAACAATGGAGGTTGTTGGAAGGGAGCCAAAGAAGGAAGGGTTTACTCTGCGTGTATAGATGACCACACAAAAGGTTGCAAGTGCCCACCAGGATTCAGGGGTGATGGAGTCAACTCCTGTGAAGATATTGACGAGTGCAAAGAGAAACTGGCTTGCCAGTGCCCAGAGTGCAATTGCAAGAATACCTGGGGGAGTTATGACTGCAAATGCAATGGTGGTTTGTACTACATGCGAGAGAATGACATGTGTATAGGTAAATATACGGCTTCAGTGGCCAACGGGGGCTTTATTTGGATGGCTATTCTGATCATAGCTATTGCTGGTGCTGGGGGTTATGCTTTTTACAAGTACAGAATCCAGAGATACATGGATTCGGAGATAAGGGCAATTATGGCTCAATACATGCCCTTGGATAACCAACCGGAGAACTCCAATCAACTTCACAATGAAGTGTAG 1875 0.4528 MRIKLSFLWILLLCGSRCQGRFVVEKNNLKITSPKSLRGIYECAIGNFGVPKYGGAMIGAVVYPKVNQNGCSRFEGADSLFSSKPGGFPTFVLVDRGDCFFTLKARNAQNGGAAAILVADDRVEPLITMDTPEEGNGANGDDYVEKISIPSALISKGLGDSIKNSLSNGEMVNVNLDWRESLPHPDDRVEYEFWTNSNDECGPKCESQISFVTTFKGAAQLLEKKGFTHFTPHYITWYCPEAFILSKQCKAQCINNGRYCAPDPEQDFSRGYDGRDVVIQNLRQACFFKVANESGEPWKWWDYFTDFSIRCPMRENRYNDECSDQVIKSLGFDVKRIKDCVGDPNADVENPVLKAEQDAQIGKDSRGDVTILPTLIINNRQYRGKLSRAAVLKAICSAFKETTEPSICLTPDMETNECLVNNGGCWQDKSTNITACRDTFRGRVCECPIVQNVKFVGDGYTHCEATAALRCAVNNGGCWKGAKEGRVYSACIDDHTKGCKCPPGFRGDGVNSCEDIDECKEKLACQCPECNCKNTWGSYDCKCNGGLYYMRENDMCIGKYTASVANGGFIWMAILIIAIAGAGGYAFYKYRIQRYMDSEIRAIMAQYMPLDNQPENSNQLHNEV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0028 624 SMART egfca_6 515 557 IPR001881 GO:0005509
Aev02g0028 624 Gene3D Laminin 409 454 - -
Aev02g0028 624 Pfam PA domain 59 162 IPR003137 -
Aev02g0028 624 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 11 603 - -
Aev02g0028 624 Gene3D - 19 185 - -
Aev02g0028 624 Gene3D Laminin 470 557 - -
Aev02g0028 624 CDD EGF_CA 515 546 - -
Aev02g0028 624 SUPERFAMILY PA domain 91 172 IPR046450 -
Aev02g0028 624 ProSitePatterns Calcium-binding EGF-like domain signature. 515 541 IPR018097 GO:0005509
Aev02g0028 624 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 11 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0028 Aev-Chr2 146783 149966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0028 5 624 Miscellaneous Gene Families AT3G52850 68.650 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0028 - - gmx:100815266 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3087 06 32472134 32477049 Aev02g0028 02 146783 149966 PCT