Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2948 ATGAGTGATGCAGATGCAGATGCAGACCCCCCACTTTCACCTCTACTCTGTTTCTCAAGTTTCCAATTCTTTCTTAATCCCTTTCACACACTCTCACTACAACTTCCTTCTTCCCCAATGGATGCAAAGTCTGCTGAAGTTTCCTCTGAACCATTGAAGTATCAGACATGGTTCTTGAAAGTTCCCATCCACTGTGAAGGTTGTAGGAGGAAGGTGAAGAAAGTTCTGCGGGGCATTGATGGGGTTTTCACTGCAACTATTGATCCACAACAGCAGAAGGTGACAGTCACAGGAAGCGTTGGTTCTGATACCCTCGTAAAGAAGCTTCTCAAAGCCGGAAAACACGCCGAGATTTGGCCGGAAAATCTATCCGTCAGCAAGGGAAAAATATCCGGCAAAGCGAAGAAGAGGAACGAACAAAGAGACCCAGAAAGCGTCGAGAACCATTCTGCTAGAAATGGTGAATCCAACCTCTGCTCTGCTAAAAACAGGGGAATTGAAAGTGCTGACAATTCAAACAAAAGTGGAAAAAGCAGGAAGAGCAATGACTCAAAAACCGGCGGCAACCCGCCGGAAAACTCCCCGGCGGGCACTGAGACATCTGAACCAGAGCAAAAGGGTGGTGAAGTTGAAGGGGTAACCGGAAAAGGTGGTGAAGTGGGTTGTGTGAAGAAGAAGAAGAAGAAGAAGAAGAAAACGAAAGTTCAGAGTGGTGGCAGTGAGTTGAGTTCAGCATCATCATCATCAAGCAATGCAGGTGCACACACTGGATCACAGTTCCAGAGCAGTACTGGGCAGGTTGTGGGCCAGATGAATCTCAGCCCTACACGTCAGCAATCACACCTGTATCCAGAAACTTACTGTTACCCTCCTTTGGTGTACCTTGCAACATATAACAGAATGTGTCCCTTTGGTAAAATGAGTGGTCCTTCCTACTATGTTTCACCATTGCCCTACATGTATTCTGCCATGCAGGACCATGACCCTTATCAGCTCCAACAGCAATCTGCACCGTTGGTTCCATTTGAGATCTTCAGTGATGAAAATGCTAATGGTTGTTCTATCATGTGA 1071 0.4641 MSDADADADPPLSPLLCFSSFQFFLNPFHTLSLQLPSSPMDAKSAEVSSEPLKYQTWFLKVPIHCEGCRRKVKKVLRGIDGVFTATIDPQQQKVTVTGSVGSDTLVKKLLKAGKHAEIWPENLSVSKGKISGKAKKRNEQRDPESVENHSARNGESNLCSAKNRGIESADNSNKSGKSRKSNDSKTGGNPPENSPAGTETSEPEQKGGEVEGVTGKGGEVGCVKKKKKKKKKTKVQSGGSELSSASSSSSNAGAHTGSQFQSSTGQVVGQMNLSPTRQQSHLYPETYCYPPLVYLATYNRMCPFGKMSGPSYYVSPLPYMYSAMQDHDPYQLQQQSAPLVPFEIFSDENANGCSIM* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2948 356 MobiDBLite consensus disorder prediction 150 172 - -
Aev01g2948 356 MobiDBLite consensus disorder prediction 132 149 - -
Aev01g2948 356 Gene3D - 53 118 - -
Aev01g2948 356 MobiDBLite consensus disorder prediction 182 201 - -
Aev01g2948 356 SUPERFAMILY HMA, heavy metal-associated domain 53 120 IPR036163 GO:0046872
Aev01g2948 356 Pfam Heavy-metal-associated domain 60 114 IPR006121 GO:0046872
Aev01g2948 356 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 44 356 - -
Aev01g2948 356 CDD HMA 59 117 IPR006121 GO:0046872
Aev01g2948 356 MobiDBLite consensus disorder prediction 129 267 - -
Aev01g2948 356 ProSiteProfiles Heavy-metal-associated domain profile. 63 118 IPR006121 GO:0046872
Aev01g2948 356 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 44 356 - -
Aev01g2948 356 MobiDBLite consensus disorder prediction 237 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2948 Aev-Chr1 31340676 31344381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2948 - - lja:Lj0g3v0144089.1 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2948 01 31340676 31344381 Aev04g1186 04 7573792 7575214 PCT