Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2932 ATGCTTGCAGAGGAGGAGAAGCCTCAAAAGACATACCCGACAATTGCCGAGGTGTTGGAGGAGCTGAAGAGAATGACGGATATAGGGTTCCCAATAGCAGCCATGGGCCTTGTGGGATACCTTAAGAACATGACCTTAGTTATTTGCATGGGAAGATTGGGGAGCCTCGAGTTAGCCGGTGGTGCTTTGGCCATAGGCTTCACCAACATAACCGGTTACTCTGTCCTCTCAGGTCTGGCCATGGGCATGGAACCACTCTGCACCCAGGCCTTCGGTTCTAGAAACTTCTCCTTAGTCTCCCTAACTTTGCAAAGGACAATCCTAATGCTACTTCTGTTCTCTCTTCCCATTTGCCTCCTGTGGCTCAACCTCGAATCCTTAATGCTGCTGCTTCACCAGAACCCTGACATAGCCAGAGTGGCAAGCCTCTACTGCCGATACTCCCTCCCTGACCTCATAGCCAACAGCTTCCTTCACCCTCTTCGGATCTACCTGCGAAGCAAAGGCACGAGCTGGCCACTGATGTGGTGCACTCTGCTAGCAATTCTCCTGCACCTTCCCATCATCAGCATCTTAACCTTCAAGCTTCACCTCGGCGTAGCAGGGATCGCAATCTCTGCTTTTGTTGCCAATTTCAATACCCTCTTCCTCCTCGTAGCGTACATGCTCTACACGCGCGTGATCCCCAAGGAGTCGCTGTCGATGCCATTAATAGTGCCGCGTCCCCTGTCACACAACTTAGTAATTACCAGCACTGCCATTGCCGCAATAGGCAGAGAATGGGGGATGCTGATGAAATTCTCAATACAGAGCTGTCTAGCTGTTTGCTTGGAGTGGTGGTGGTACGAATTGATGACAATCTTGGCCGGCTACCTGCAGAACCCTCGCGTGGCTCTGGGCACGGCGGGCATAGTGATACAGACAACCTCTCTCCTGTACACTCTGCCCACGGCACTGAGTGCATCGGTGTCCACGAGGGTCGGCAACGAGCTCGGGGCGGGTCAGCCAGAAAGGGCAAGCTTGGCAACAGTGATAGGCATAGGACTAGCACTTGCAAGCTCAATTTTGGGTTTGGCGTGGACCACAGTAGGGAGAGAGAGATGGGGCAGGGTGTTCACGAGTGACAGTGAAGTGCTGGAGTTGACCATGATTGTGCTGCCCATAATTGGAGTGTGCGAATTGGCGAATTGTCCTCAGACAACAAGCTGCGGGATCTTGAGAGGGAGTGCTAGGCCGGGTGTTGGAGCTGCCATCAATTTCTGCTCCTTTTACTTGGTGGGAGCACCCGTGGCTGTTCTTCTCGCCTTTGTTTGGGGTCTTGGCATGGTGGGTCTCTGCTATGGCTTGCTTGCAGCGCAAGTTTCCTGTGTCGTTTCCATTCTGGTTGTGGTCTACAAGACCGATTGGGAAAGGGAGTCCTTGAAGGCTAAAAGCTTGGTTGGAATCGGAAAGCCTTATTCTTCTTATTCCTGCGACACCACATTATTACCACATGCATCAGACCACACAATACTAGCAGTCAAATGTGAACAAGCTAGTATTGCCCTCCTCAACACCACCGAATTGTAG 1569 0.5201 MLAEEEKPQKTYPTIAEVLEELKRMTDIGFPIAAMGLVGYLKNMTLVICMGRLGSLELAGGALAIGFTNITGYSVLSGLAMGMEPLCTQAFGSRNFSLVSLTLQRTILMLLLFSLPICLLWLNLESLMLLLHQNPDIARVASLYCRYSLPDLIANSFLHPLRIYLRSKGTSWPLMWCTLLAILLHLPIISILTFKLHLGVAGIAISAFVANFNTLFLLVAYMLYTRVIPKESLSMPLIVPRPLSHNLVITSTAIAAIGREWGMLMKFSIQSCLAVCLEWWWYELMTILAGYLQNPRVALGTAGIVIQTTSLLYTLPTALSASVSTRVGNELGAGQPERASLATVIGIGLALASSILGLAWTTVGRERWGRVFTSDSEVLELTMIVLPIIGVCELANCPQTTSCGILRGSARPGVGAAINFCSFYLVGAPVAVLLAFVWGLGMVGLCYGLLAAQVSCVVSILVVVYKTDWERESLKAKSLVGIGKPYSSYSCDTTLLPHASDHTILAVKCEQASIALLNTTEL* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2932 522 Pfam MatE 31 188 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev01g2932 522 Pfam MatE 271 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev01g2932 522 PANTHER PROTEIN DETOXIFICATION 55 13 485 - -
Aev01g2932 522 CDD MATE_eukaryotic 21 475 IPR045069 GO:0042910|GO:1990961
Aev01g2932 522 PANTHER MULTIDRUG RESISTANCE PROTEIN 13 485 - -
Aev01g2932 522 TIGRFAM matE: MATE efflux family protein 42 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2932 Aev-Chr1 31257116 31258975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2932 K03327 - gmx:100801932 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2932 01 31257116 31258975 Aev01g2932 01 31257116 31258975 ECH
Aev01g2932 01 31257116 31258975 Aev04g1156 04 7356865 7359442 PCT