Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2871 ATGAACGCGATTCCTTCTCCATCTCCTTCTTCGTATTCTTCTTCCTCTTCAAATTTCACTCTCTTCACTACTCAGTCCAAGCACCCAAACTACCTCTTCAGGTTCAATCTCAAAATTCCCATTTTGCCCTCTCCACCATGTTGCTCTCTCAGGGACTCCACCTCATCGACCACCGTGCTGGACAAAAATGCCCTTCCCTCCCAGCAGAGTCCCGGCGGAAATGCCGTTTCGGTTACAGAGTCGAGCTTTGAGGGTGGGCTCGTGGTTCGCCGGCCAGTGATGGAGGTTCCCGGCGAGGTTTCCGACGAGGAGGAGGAAGCGAAGGAGGCGTCAAAGGATGATGATGGTGATGAATCGAAGGGTACTTCTGTGATCGACGCGAAGCTCAAGAAGTTCGCAAAGAAGATGCCGATGTTTGAGCCCGAAAGGGTGGAATCGGATTCCAAAGAGAAGCCGCTAACTGTGAACTTAGATTTGGCATTGTACAAGGCGAAGATTCTGGGTAGGAAGTTTCAGTATGAAGAAGCAGAGGCAATACTTGAGAAGTGTATACGCCGTTGGCCGGAAGATGGTCGACCTTATGTGGCACTTGGGAAAATACTGAGCAAACAATCAAAGACAAGTCAAGCCAGAGAAGTATACGAAAAAGGTTGCCAAGCTACTCTCGGTGAAAATCCTTACATTTGGCAGTGCTGGGCTGTTCTTGAGAAGAAAATGGGGAATTTCAGGAGAGCAAGAGAATTATTCGATGCTGCAACGGTTGCTGATAAGAATCATGTTGCTGCTTGGCATGGATGGGCTGTTCTAGAGTTAAAGCAAGGGAATATAAAAAAGGCTAGGAGTTTACTTGTGAAAGGTCTTAAATACTGTGGACAGAATGAGTACATTTACCAAACACTTGCATTGCTTGAAGTTAGAGCTAATAGGTATCAGCAGGCTCGATATTTGTTCAATCAAGCCACCAGGTGTAATCCTAATAGCTGTGCTAGTTGGCTTGCTTGGGCACAAATGGAGGTGGGACAGGAAAACTACCGTGTTGCTAGGCGATTGTTTGAGAAAGCAGTACAGGCAAGTCCTAAAAATAGGTTTGCTTGGCATGTATGGGGAATCTTTGAAGCTAACATGGGCTACATTGACAAGGGAAGGAAGCTTTTCAAGATTGGTCATGCTCTAAATCCAAGGGATGCTGTTCTGCTTCAATCTCTTGCGTTGCTAGAATACAAGCACTCGACAGCAAATCTTGCTCGGGTCTTGTTCAGGAGAGCATCTGAATTGGATCCAAGGCATCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAAGGGAACTTGAATACAGCTAGAGAATTATACCAAAAGGCCATATCAATTGATTCGAACAGTGAAACTGCTTCTAGGTGTCTTCAGGCTTGGGGTGTTCTGGAGCAGAGGGTTGGTAATCTTTCAGCCGCACGCAGATTATTTAGATCCTCATTGAATATCAATTCTCAGAGTTATGTGACGTGGATGACTTGGGCATCACTGGAGGAAGATCAAGGAAATTCTGTTCGTGCTGAAGAGATTCGTAACCTCTACTTCCAGCAGCGCACGGAAGTTGTGGATGATGCTTCATGGGTTATGGGATTCTTAGATATCATAGACCCAGCCATTGACAGTTTGAAGAGACTCTTCAAGCTGGACCAGAATTCTTACAACATGCCACCAGATTCTTTGAGAAATGTTGCCGCCGGAACAAGTAAAAACAAGTTTGATTTGGCCAGCCCAACATCTAACGGCAATGATGGTGAAGATGATGAAAGTGATTTTGATTTGGATGCTTTCATTATGGAAAGGTTGTCCTTAGATCCGTCCAATATTGAGGTTCAATTGGAACCACCTAAAAGTTCTTCTGTGAAGAGGATTTGGAGATCAAACAATAGAATTGCCAAGGTGTAA 1941 0.4523 MNAIPSPSPSSYSSSSSNFTLFTTQSKHPNYLFRFNLKIPILPSPPCCSLRDSTSSTTVLDKNALPSQQSPGGNAVSVTESSFEGGLVVRRPVMEVPGEVSDEEEEAKEASKDDDGDESKGTSVIDAKLKKFAKKMPMFEPERVESDSKEKPLTVNLDLALYKAKILGRKFQYEEAEAILEKCIRRWPEDGRPYVALGKILSKQSKTSQAREVYEKGCQATLGENPYIWQCWAVLEKKMGNFRRARELFDAATVADKNHVAAWHGWAVLELKQGNIKKARSLLVKGLKYCGQNEYIYQTLALLEVRANRYQQARYLFNQATRCNPNSCASWLAWAQMEVGQENYRVARRLFEKAVQASPKNRFAWHVWGIFEANMGYIDKGRKLFKIGHALNPRDAVLLQSLALLEYKHSTANLARVLFRRASELDPRHQPVWFAWGWMEWKEGNLNTARELYQKAISIDSNSETASRCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYVTWMTWASLEEDQGNSVRAEEIRNLYFQQRTEVVDDASWVMGFLDIIDPAIDSLKRLFKLDQNSYNMPPDSLRNVAAGTSKNKFDLASPTSNGNDGEDDESDFDLDAFIMERLSLDPSNIEVQLEPPKSSSVKRIWRSNNRIAKV* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2871 646 MobiDBLite consensus disorder prediction 93 123 - -
Aev01g2871 646 Pfam Tetratricopeptide repeat 238 285 - -
Aev01g2871 646 SUPERFAMILY TPR-like 169 406 IPR011990 GO:0005515
Aev01g2871 646 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 7 633 IPR044624 GO:0003729|GO:0006397
Aev01g2871 646 ProSiteProfiles TPR repeat profile. 294 327 IPR019734 GO:0005515
Aev01g2871 646 SUPERFAMILY TPR-like 362 507 IPR011990 GO:0005515
Aev01g2871 646 SMART hat_new_1 240 272 IPR003107 GO:0006396
Aev01g2871 646 SMART hat_new_1 376 408 IPR003107 GO:0006396
Aev01g2871 646 SMART hat_new_1 410 442 IPR003107 GO:0006396
Aev01g2871 646 SMART hat_new_1 342 374 IPR003107 GO:0006396
Aev01g2871 646 SMART hat_new_1 308 340 IPR003107 GO:0006396
Aev01g2871 646 SMART hat_new_1 205 238 IPR003107 GO:0006396
Aev01g2871 646 SMART hat_new_1 274 306 IPR003107 GO:0006396
Aev01g2871 646 SMART hat_new_1 444 479 IPR003107 GO:0006396
Aev01g2871 646 SMART hat_new_1 481 513 IPR003107 GO:0006396
Aev01g2871 646 Pfam Tetratricopeptide repeat 163 185 IPR019734 GO:0005515
Aev01g2871 646 Pfam Tetratricopeptide repeat 432 462 IPR019734 GO:0005515
Aev01g2871 646 Gene3D Tetratricopeptide repeat domain 225 564 IPR011990 GO:0005515
Aev01g2871 646 Gene3D Tetratricopeptide repeat domain 151 224 IPR011990 GO:0005515
Aev01g2871 646 ProSiteProfiles TPR repeat profile. 430 463 IPR019734 GO:0005515
Aev01g2871 646 SMART tpr_5 467 500 IPR019734 GO:0005515
Aev01g2871 646 SMART tpr_5 226 259 IPR019734 GO:0005515
Aev01g2871 646 SMART tpr_5 157 190 IPR019734 GO:0005515
Aev01g2871 646 SMART tpr_5 430 463 IPR019734 GO:0005515
Aev01g2871 646 SMART tpr_5 191 224 IPR019734 GO:0005515
Aev01g2871 646 SMART tpr_5 328 361 IPR019734 GO:0005515
Aev01g2871 646 SMART tpr_5 294 327 IPR019734 GO:0005515
Aev01g2871 646 SMART tpr_5 396 429 IPR019734 GO:0005515
Aev01g2871 646 SMART tpr_5 260 293 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2871 - - mtr:MTR_4g122060 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2871 01 30967255 30970181 Aev01g2871 01 30967255 30970181 ECH