Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2869 ATGTTAAACAAATCTACCTCTTTCTTCATCATGGCCACTGGACAACTATTCTCCCGTAACACGCAAGCTTTATTTTACAATTACAAACAACTCCCCATCCAGCGGATGCTTGATTTTGACTTCCTTTGTGGTAGGGAAACACCATCCGTTGCTGGAATAATTAATCCTGGTTCTGAGGGATTTCAGAAGCTCTTTTTTGGTCAGGAGGAAATTGCCATCCCAGTTCATGCTACCATTGAAGCAGCTTGTGCTGCGCATCCTACTGCTGATGTATTCATCAACTTTGCATCATTTAGAAGTGCTGCTGCGTCATCCATGGCTGCTTTGAAGCAACCAACAATTAGAGTTGCTGCTATTATTGCTGAAGGTGTACCTGAATCAGACACTAAGCAATTGATTGCATATGCCCGGGAAAACAATAAGGTTCTTATTGGCCCAGCCACTGTTGGAGGCATTCAAGCTGGTGCTTTTAAGATTGGTGACACTGCTGGAACGATTGACAATATAATTCATTGCAAGCTCTACAGACCTGGATCTGTTGGATTTGTCTCTAAATCCGGTGGGATGTCAAATGAATTATACAACACTATTGCCCGTGTAACTGATGGAATTTATGAAGGCATTGCCATTGGAGGAGATGTTTTCCCGGGTTCCACTCTTTCTGACCATGTCTTAAGGTTTAACAACATACCCCAGGTTAAAATGATGGTAGTACTTGGGGAACTTGGTGGACGTGATGAGTATTCTCTAGTGGAGGCACTAAAGCAAGGGAAAGTGACAAAGCCAATTGTTGCCTGGGTTAGCGGAACCTGCGCACGACTCTTCAAATCTGAAGTTCAATTTGGTCATGCTGGAGCTAAAAGTGGAGGTGAGATGGAGTCTGCTCAAGCAAAGAATCAGGCTCTAAAGGAAGCTGGAGCTGTTGTTCCCACTTCATATGAAGCTTTTGAAGATGCAATAAAGGAAACATTTAACAAGTTGGTTGAAGCGGGACAGATCACACAAGTGAAGGAGTTTACCCCTCCACCAATCCCTGAGGACCTTAACTCTGCAATTAGGAGTGGAAAAGTCCGTGCTCCAACTCATATTATTTCCACCATCTCTGATGACAGAGGTGAGGAGCCATGCTATGCTGGTGTACCCATGTCTTCTATTATTGAAAAGGGTTATGGTGTGGGTGATGTTATCTCTCTTTTGTGGTTCAAACGCAGCCTTCCTCGATATTGCACTCAATTTATTGAGATATGCATCATTCTATGTGCTGACCATGGTCCATGTGTCTCTGGTGCTCACAATGCCATAGTGACAGCAAGGGCTGGTAAGGACCTTGTCTCCTGTCTTGTATCAGGTTTGCTTACAATTGGTCCTCGATTCGGAGGTGCCATTGATGATGCTGCTCGCTACTTCAAGGATGCCTATGACAGGAGTCTCACACCTTATGAATTTGTTGAAAGTATGAAGAAGAAAGGCATTCGTGTGCCAGGAATCGGGCACAGAATCAAGAGTAGGGATAACAAGGATAAGAGAGTTGAGGTGCTACAGAAGTTTGCGCGCACACATTTTCCTTCTGTGAAATACATGGAATATGCTGTCGAAGTTGAAAACTACACTCTTTCAAAGGCAAATAACCTGGTTCTAAACGTAGATGGTGCAATCGGGTCCCTCTTCTTGGATCTTCTTGCTGGTAGTGGAATGTTCACCAAACAAGAGGTTGATGAAATTGTAGAGATTGGCTATCTGAATGGCCTTTTTGTTCTGGCACGCTCCATTGGTCTGATTGGGCATACATTTGACCAAAAGAGATTGAAACAACCACTCTACCGCCACCCATGGGAGGATGTTCTTTACACAAAGTGA 1857 0.4389 MLNKSTSFFIMATGQLFSRNTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEEIAIPVHATIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIRVAAIIAEGVPESDTKQLIAYARENNKVLIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVTKPIVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALKEAGAVVPTSYEAFEDAIKETFNKLVEAGQITQVKEFTPPPIPEDLNSAIRSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIIEKGYGVGDVISLLWFKRSLPRYCTQFIEICIILCADHGPCVSGAHNAIVTARAGKDLVSCLVSGLLTIGPRFGGAIDDAARYFKDAYDRSLTPYEFVESMKKKGIRVPGIGHRIKSRDNKDKRVEVLQKFARTHFPSVKYMEYAVEVENYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFTKQEVDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYTK* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2869 618 CDD CCL_ACL-C 379 616 - -
Aev01g2869 618 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family active site. 269 285 IPR017440 -
Aev01g2869 618 Gene3D - 148 333 IPR016102 -
Aev01g2869 618 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 3. 178 203 IPR017866 -
Aev01g2869 618 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 146 IPR036291 -
Aev01g2869 618 Gene3D - 475 559 IPR016143 -
Aev01g2869 618 Gene3D - 12 147 - -
Aev01g2869 618 PANTHER ATP-CITRATE SYNTHASE 11 618 - -
Aev01g2869 618 PANTHER ATP-CITRATE SYNTHASE BETA CHAIN PROTEIN 2-LIKE 11 618 - -
Aev01g2869 618 SUPERFAMILY Citrate synthase 144 616 IPR036969 GO:0046912
Aev01g2869 618 Pfam CoA-ligase 183 308 IPR005811 GO:0003824
Aev01g2869 618 Pfam Citrate synthase, C-terminal domain 409 608 IPR002020 GO:0046912
Aev01g2869 618 Gene3D Citrate Synthase, domain 1 407 474 IPR016142 -
Aev01g2869 618 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 1. 184 213 IPR033847 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2869 Aev-Chr1 30952636 30956782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2869 11 618 Acyl Lipid Metabolism Gene Families AT3G06650 92.270 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2869 K01648 - gmx:100801407 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2869 01 30952636 30956782 Aev01g2869 01 30952636 30956782 ECH
Aev01g2869 01 30952636 30956782 Aev04g1064 04 6664927 6670007 PCT