Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2864 ATGGAGCAGTCTTCGCCGGAGAATCTAATAGTCGTGAACCGTGACCCAAACGGCGTCGCTGTGGTGACGATTAATCGTCCGGGGTCGCTAAACTCGCTGACGAGGTCCATGATGGTGGATCTGGCCCAGGCCTTCAAGAGCCTGGACATAGACAAGTCGGTGCGGGTCATCATATTAACCGGGGCGGGTCGATCCTTCTGCTCGGGCGTGGACTTGACCTCTGCAGAAGAAGTGTTCAAGGGCGACGTTAAGGACCCCGAAAGCGACCCGGTTGTTCAAATGGAGCGCTGCCGAAAGCCCATCATCGGAGCCATTAAAGGATTCGCCGTCACCGCTGGCTTCGAGATTGCCCTCGCTTGTGACATCTTGGTCGCTGCCAAAGGATCCAAGTTCATTGACACCCACGCTAGGTTTGGGATATTTCCTTCGTGGGGATTGTCTCAGAAGCTTTCGCGGATTATAGGGGTGAATAAAGCCCGCGAGGTGTCTCTGACGGCCACGCCTTTGGCTGCTGAGGTAGCTGAGATGCTGGGTTTGGTGAACCATGTTGTTGAGGAGGGTGAAGTGTTGAAGAGGAGCAGGGAGATTGCGGATGCCATCGTGAAGAATAACCAGGACATGGTGATGAGGTACAAGTCTGTCATCAACGATGGCATCACGCTTGATCTTGGCTCTGCTCTTTCCCTGGAAAAGGAGAGGGGGCATGATTATTATAACCGAATGACGAAGGAGCAATTCAGGAAGATGCAGGAATTCATAGCAGGTCGAAGTTCAAAGAAACAATCCAAATTTCTCTCGTCCAATCCACAAACCACAACCATGACGACAAATGCCAAAACAACAAAGGATTCCTTCAGTAGCTTCGACGTCGTTTCAGACCATTCAGATCACTACTATGCATCGCCACAGCCAAAGGACTGCTTCAGTAACTCGAAGAGCCGCGTGCACAAGCACGTAATGAAAGAGTGGAAAATACTGGAGGGAAGCCTGCCCGACTCCATCTTCGTTCGGGTCTACGAGGGCCGCATCGATCTGATGCGGGCCGTGGTCGTGGGGGCCGCGGGCACACCGTACCACGACGGGCTTTTCTTCTTCGACATTGCACTCCCCTCCGATTACCCCTCCAGCCCACCCAACGTCATCTACCGCTCCTTCGGGATCGCTCTGAACCCGAACCTCTACCCGAGCGGCAGAGTCTGCCTGAGCCTGCTGAACACGTGGTCCGGAGACAAGAACGAGAAATGGAACCCTAAACGGTCCACGCTGCTCCAGGTCCTCATCTCCATCCAAGGCCTCGTCCTCAACGACCATCCATTCTTAAACGAGCCCGGCCGAGAGGCGTTTCCTCGCTTCGACTCCAGGTCACGTGCCTACAACGAGCAAGTGTTCGCCCTCACGTGCCAAAGTGCCATTCGCCTCATTCGCACTCCGCCCATGAACTTTGCGGAATTTATCAAGGCCCACTTTTGCGAGCGTGCGGTTAAGATCCTCACGGCGTGTGGTGCGTACGCGAATGGGCGCGTGAGGGTTGGGTTTTATGGTTGTTCCGAAGACAGCAGCGATTACACAGGGTCGCGTTCTGTGTCATTCAATAGTTCGATCCAGAATTTGTATCCAGATATGGTTCAGATGTTTCGGTCGTGCGGTGCCGTTTTGGATGCTTCATTGGAAGTGTTGGTGCTGGAGGAGCAGACGCAAGTGGAGAATGAACAACCCGACACTTTTGTTTTGTTGGAAGAGGAACAGGAGCCGATTCAAGTGATGGATTATGATGATGAGCAGAAGAGCAACAAAACTAAAGGTGGGATCTTCAAGAAGGCCGTGGCCAAGATCAAAAAGGTCTTTCAATGGAAGAATAGTAGTGCACAAAAGAGGATCGTGAATCGTTATGATTGA 1896 0.5269 MEQSSPENLIVVNRDPNGVAVVTINRPGSLNSLTRSMMVDLAQAFKSLDIDKSVRVIILTGAGRSFCSGVDLTSAEEVFKGDVKDPESDPVVQMERCRKPIIGAIKGFAVTAGFEIALACDILVAAKGSKFIDTHARFGIFPSWGLSQKLSRIIGVNKAREVSLTATPLAAEVAEMLGLVNHVVEEGEVLKRSREIADAIVKNNQDMVMRYKSVINDGITLDLGSALSLEKERGHDYYNRMTKEQFRKMQEFIAGRSSKKQSKFLSSNPQTTTMTTNAKTTKDSFSSFDVVSDHSDHYYASPQPKDCFSNSKSRVHKHVMKEWKILEGSLPDSIFVRVYEGRIDLMRAVVVGAAGTPYHDGLFFFDIALPSDYPSSPPNVIYRSFGIALNPNLYPSGRVCLSLLNTWSGDKNEKWNPKRSTLLQVLISIQGLVLNDHPFLNEPGREAFPRFDSRSRAYNEQVFALTCQSAIRLIRTPPMNFAEFIKAHFCERAVKILTACGAYANGRVRVGFYGCSEDSSDYTGSRSVSFNSSIQNLYPDMVQMFRSCGAVLDASLEVLVLEEQTQVENEQPDTFVLLEEEQEPIQVMDYDDEQKSNKTKGGIFKKAVAKIKKVFQWKNSSAQKRIVNRYD* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2864 631 CDD crotonase-like 10 200 - -
Aev01g2864 631 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 275 569 - -
Aev01g2864 631 SMART ubc_7 317 471 - -
Aev01g2864 631 MobiDBLite consensus disorder prediction 257 278 - -
Aev01g2864 631 Gene3D Ubiquitin Conjugating Enzyme 269 547 IPR016135 -
Aev01g2864 631 SUPERFAMILY ClpP/crotonase 8 263 IPR029045 -
Aev01g2864 631 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 314 471 IPR000608 -
Aev01g2864 631 CDD UBCc 316 443 IPR000608 -
Aev01g2864 631 SUPERFAMILY UBC-like 310 479 IPR016135 -
Aev01g2864 631 Pfam Enoyl-CoA hydratase/isomerase 16 241 IPR001753 GO:0003824
Aev01g2864 631 Gene3D - 2 236 - -
Aev01g2864 631 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 275 569 - -
Aev01g2864 631 Pfam Ubiquitin-conjugating enzyme 320 462 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2864 Aev-Chr1 30927812 30932470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2864 285 549 Miscellaneous Gene Families AT2G33770 47.015 1.39e-67 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2864 K01692 - gmx:100170725 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2864 01 30927812 30932470 Aev01g2864 01 30927812 30932470 ECH