Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2860 ATGTGCCCTTCTGGCAGGAGCCTCCGCCCAAGCACCACCGCCGCCTCCGCTTTCCGTCCGGCGTTCGACATCATGGACGCCGACCACGACGGTAAGATAAGCCGCGATGACCTCCGCGCCTTCTACTCATCCGTGTACGGCGGCGGCGAAGACGACGTGATTGGGGCGATGATGACGGTGGCGGACACCAACAAGGACGGGTTCGTGGAGTACGAGGAATTCGAGCGCGTGGTGGTTTCTGCGGGGAACGCGGAAAACAGGAAGAATAGACCGTTGGGGTGTGGGGCCATGGAGGACGTGTTCAGGTTCATGGACAAGGACGGCGACGGCAAGCTCAGTCACCGCGACCTCAAGGCTTACTTCGCATCCGCCGGATTCGCCGCCACAGACGACGACATCGCCGCCATGATCAAGTTCGGTGGTGGAGACCTAAACGGTGGCGTTACATTCGACGGCTTGCTTCGTATATTAGCTCTTGATTGTTCCTCCAGCTGA 495 0.6 MCPSGRSLRPSTTAASAFRPAFDIMDADHDGKISRDDLRAFYSSVYGGGEDDVIGAMMTVADTNKDGFVEYEEFERVVVSAGNAENRKNRPLGCGAMEDVFRFMDKDGDGKLSHRDLKAYFASAGFAATDDDIAAMIKFGGGDLNGGVTFDGLLRILALDCSSS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2860 164 ProSiteProfiles EF-hand calcium-binding domain profile. 97 127 IPR002048 GO:0005509
Aev01g2860 164 CDD EFh 18 74 IPR002048 GO:0005509
Aev01g2860 164 ProSitePatterns EF-hand calcium-binding domain. 26 38 IPR018247 -
Aev01g2860 164 PANTHER CALCIUM BINDING PROTEIN 1 161 - -
Aev01g2860 164 Pfam EF-hand domain pair 19 77 IPR002048 GO:0005509
Aev01g2860 164 SMART efh_1 17 45 IPR002048 GO:0005509
Aev01g2860 164 SMART efh_1 53 81 IPR002048 GO:0005509
Aev01g2860 164 SMART efh_1 96 124 IPR002048 GO:0005509
Aev01g2860 164 ProSiteProfiles EF-hand calcium-binding domain profile. 49 84 IPR002048 GO:0005509
Aev01g2860 164 Gene3D - 7 88 - -
Aev01g2860 164 Pfam EF hand 97 119 IPR002048 GO:0005509
Aev01g2860 164 SUPERFAMILY EF-hand 18 157 IPR011992 -
Aev01g2860 164 Gene3D - 89 158 - -
Aev01g2860 164 PANTHER CALMODULIN-RELATED PROTEIN 97A-LIKE 1 161 - -
Aev01g2860 164 ProSiteProfiles EF-hand calcium-binding domain profile. 21 48 IPR002048 GO:0005509
Aev01g2860 164 ProSitePatterns EF-hand calcium-binding domain. 62 74 IPR018247 -
Aev01g2860 164 CDD EFh 98 158 IPR002048 GO:0005509
Aev01g2860 164 ProSitePatterns EF-hand calcium-binding domain. 105 117 IPR018247 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2860 1 157 EF-hand Containing Proteins AT5G49480 57.500 9.53e-57 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2860 K02183 - gmx:100527230 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2860 01 30900919 30901413 Aev01g2860 01 30900919 30901413 ECH