Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2849 ATGGGAAGGGGCTCAACCTCAACCTCAGTGTCCCCATTTTCACTCCATATTCTTCTTCTTCTTCTTTTTCTTCTGTTTTTCACAGTTTATTCCCACTCTTCTGTCATATGGAAGGAAGATGAAGATGGTGATATGATAGACCAAATATGCAAGAAAACACCCTTTTATGAGCTCTGCAGCAGCATCCTACACTCAAATCCTCTGGCCCCAAAAAGTAATCCAAAGGGTATGGCACTGATAATGGTGAACAACATTGAGGCAAATGCTTCTGACACACTGAACTACATTCAGGAGCTTATAAAACAGACCTCAGACCAACAATTGGAGCAGGAATTGGCTTTCTGTGCTGAGTCTTATATCCCTGTTGTGAGATACATTCTTCCACAAGCTGCTGATGCTATAAACCAAGGCAGGTTCGGGTTTGCAAGTTACTGCATATCTGATGCAGAGAAGGAAGTTGATGCTTGCAACAAGAAATTCTCATCAGGCCCAACTCAGTCACCTTTAGGTGATAGAAATAGCATTATGCAGAAGCTTGTGGATGTGGCTGCAGCAATTGTAAAACTATTATTGAGTGGCTGA 582 0.421 MGRGSTSTSVSPFSLHILLLLLFLLFFTVYSHSSVIWKEDEDGDMIDQICKKTPFYELCSSILHSNPLAPKSNPKGMALIMVNNIEANASDTLNYIQELIKQTSDQQLEQELAFCAESYIPVVRYILPQAADAINQGRFGFASYCISDAEKEVDACNKKFSSGPTQSPLGDRNSIMQKLVDVAAAIVKLLLSG* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2849 193 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 190 IPR035513 -
Aev01g2849 193 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 190 IPR006501 GO:0004857
Aev01g2849 193 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 193 - -
Aev01g2849 193 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 15 193 - -
Aev01g2849 193 Pfam Plant invertase/pectin methylesterase inhibitor 45 186 IPR006501 GO:0004857
Aev01g2849 193 CDD CIF_like 44 190 IPR034087 GO:0004857|GO:0043086
Aev01g2849 193 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 191 IPR035513 -
Aev01g2849 193 SMART PMEI_2 41 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2849 Aev-Chr1 30813824 30814405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2849 - - gmx:100820305 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2849 01 30813824 30814405 Aev04g1046 04 6551743 6552081 PCT