Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2407 ATGGGGAAGAAAAAGAAGCATGTAGGAGAAACAAGCGAAGATGGTGAAAACCAAAGCAAAGTGGGAGATAGCAAAAGCCCCAAATCATATGATGATGATACCATGGCATTCATATCCATGTCTCAGGAGTTGAAGGGTGAGGGGAACAAGTTGTTCCAAAAGAGGGACCTTCAAGGAGCTTTAATGAAATATGAGAAAGCTCTCAAATTGCTTCCAAGGAATCATGTTGATGTGTCCTATCTGAGGAGTAACATGGCTGCATGCTACATGCAGATGGGACCTAGTCAGTACCCTAGGGCAATTCATGAATGCAATTTGGCTCTTGAGGTAACACCAAGATATAGCAAGGCTCTGTTGAAGAGGGCAAGGTGCTATGAGGCTTTAAATAGGCTGGATTTGGCTCTGATGGATGTTGGTACTGTTGTGAAGGTGGAGCCGGATAATGTCACGGCATTGGAGATGGTAGAGAAGGTGAAAAATGCACTTGAGGGGAAAGGATTAAGAGTAAATGGTACAACGATTGAGTTGCCTCCTGATTATGTGGAGCCACCTAATGCTGTACCACCGAATGTAGGGAAAGAGAAGACACGCAAGAAGAAGGGAAATAAACAGGAGGAGAAGGCTCCTGATGTCGAAGTTGAGGAAAAGCAAGACGAGGAGGAACCTGAAGAGAATAAGGCTGATGGCAGTGTTCTGGAGAAGAAGACCAACAAATCCAAAAAGAAGAAGGCCAAGGGTAAAATTGATGAGAAGAAGGCTGATATTAAGGAGATTGTAGAGGTCAAAGGTAATGGTAAAAGGGAAGATTTACCTAAGAAATCAGCAAAACTTATTTTTGGTGATGATATAAGATGGGCTGAATTGCCTCGTCATTGCACCCTCTTGCAGTTAAGAGTAGTGATTTGTGGTAGATTCCCTAGCCTAGGAGCCATTCTTGTCAAATACAGGGACCAAGAAGGTGACTTGGTAACAATCACTTCTGATGATGAATTAAGATTGGCTGAAACAGGATCTCAGGGTTCTATCCGGCTGTATATAGTAGAAGCTGCTCCTGAGCAGGATCCGTTCTATGAGAAATTCAAAGTACAGGTGGAGGAAATTACCTGTAATTATGTACCCGAGAATAGGGTTGCGGTAAAAGCAAAGGAAATTGTCAGCTCATCTTGCATTGAGGATTGGATAGTTCGGTTTGCCAAACTATTCAAGGACCATGTTGGATTCGAATCTGACAGGTATTTGGATTTTCATGAACTTGGGATGAAGCTCTATTCCGAGGCTTTGGAGGAAGCGGCTACAAGCGAAGAAGCACAAAACTTATTTGACATGGCAGGAGATAAGTTCCAAGAGATGACCGCTCTAGCATTGTTCAACTGGGGGAATGTGTACATGTCAAGGGCAAGGAAGAAAGTATATTTCACAGGAGATTCTTCTAAAGAGCACCTATGTGAACAAATCCAAAGTTCATATGAATGGGCACAGAAAGAATATGCAAAAGCAGGAGAAAAATATGAAGAAGCCATTGCAACCAAATCAGATTTTTTCGAGGGCTTTCTGGCACTAGGGCAGCAGCAGTTTGAGAAAGCGAAACTTTCTTGGTATTATGCACTTAGTAGCAATGTAGATTTACAAACATGGACATCCACTGAGGTTTTTCAACTTTACAACAATGCTGAGGATAATATGGAGAAAGGAATGCAGATATGGGAAAAATCAAAAGAGAAGCATTTGAGTAAAGCATCTAATTCAGAGGATGTACAATTACTATCCGAGAACTTGGAGTGGGAGGGGCTGCTTAAACATATATCCTCAGATGAAGTTGCTGAACAGGAGACAAAGATGAGGTCTCAAATTAATCTCCTATGGGGTACCATGCTTTATGAACGATCGATCGTAGAATTCAAATTGGGGCTACCAGTTTGGAATGAATCTCTGGAAGTAGCAGCTGAGAAATTTGAACTTGCTGGAGCTTCTCCAACAGATATATCTGTAATGTTGAATAATCACTGTTCCAATAATACTGCAGCAGAGGGTGTAGGATTCAAAATTGATGAAATAGTACAGGCATGGAATGACATGTACGAAGCTAAAAAGTGGCAGAGTGGATTTCCATCATTTCGTTTGGAACCGTTGTTTAGAAGGCGAGTTTCAAAAGCTTTTCAAGCATTTGAGCTTGCATGA 2178 0.4174 MGKKKKHVGETSEDGENQSKVGDSKSPKSYDDDTMAFISMSQELKGEGNKLFQKRDLQGALMKYEKALKLLPRNHVDVSYLRSNMAACYMQMGPSQYPRAIHECNLALEVTPRYSKALLKRARCYEALNRLDLALMDVGTVVKVEPDNVTALEMVEKVKNALEGKGLRVNGTTIELPPDYVEPPNAVPPNVGKEKTRKKKGNKQEEKAPDVEVEEKQDEEEPEENKADGSVLEKKTNKSKKKKAKGKIDEKKADIKEIVEVKGNGKREDLPKKSAKLIFGDDIRWAELPRHCTLLQLRVVICGRFPSLGAILVKYRDQEGDLVTITSDDELRLAETGSQGSIRLYIVEAAPEQDPFYEKFKVQVEEITCNYVPENRVAVKAKEIVSSSCIEDWIVRFAKLFKDHVGFESDRYLDFHELGMKLYSEALEEAATSEEAQNLFDMAGDKFQEMTALALFNWGNVYMSRARKKVYFTGDSSKEHLCEQIQSSYEWAQKEYAKAGEKYEEAIATKSDFFEGFLALGQQQFEKAKLSWYYALSSNVDLQTWTSTEVFQLYNNAEDNMEKGMQIWEKSKEKHLSKASNSEDVQLLSENLEWEGLLKHISSDEVAEQETKMRSQINLLWGTMLYERSIVEFKLGLPVWNESLEVAAEKFELAGASPTDISVMLNNHCSNNTAAEGVGFKIDEIVQAWNDMYEAKKWQSGFPSFRLEPLFRRRVSKAFQAFELA* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2407 725 MobiDBLite consensus disorder prediction 173 246 - -
Aev01g2407 725 PANTHER PROTEIN CLMP1 3 724 IPR044517 -
Aev01g2407 725 MobiDBLite consensus disorder prediction 1 30 - -
Aev01g2407 725 Pfam PB1 domain 276 347 IPR000270 GO:0005515
Aev01g2407 725 Gene3D Tetratricopeptide repeat domain 39 166 IPR011990 GO:0005515
Aev01g2407 725 CDD PB1 276 346 - -
Aev01g2407 725 Gene3D Tetratricopeptide repeat domain 416 596 IPR011990 GO:0005515
Aev01g2407 725 PANTHER PROTEIN PHOX3 3 724 - -
Aev01g2407 725 SUPERFAMILY TPR-like 42 157 IPR011990 GO:0005515
Aev01g2407 725 SMART tpr_5 79 114 IPR019734 GO:0005515
Aev01g2407 725 SMART tpr_5 41 74 IPR019734 GO:0005515
Aev01g2407 725 SMART tpr_5 115 148 IPR019734 GO:0005515
Aev01g2407 725 Gene3D - 280 349 - -
Aev01g2407 725 SUPERFAMILY CAD & PB1 domains 275 358 - -
Aev01g2407 725 ProSiteProfiles PB1 domain profile. 272 349 IPR000270 GO:0005515
Aev01g2407 725 MobiDBLite consensus disorder prediction 192 211 - -
Aev01g2407 725 MobiDBLite consensus disorder prediction 212 226 - -
Aev01g2407 725 MobiDBLite consensus disorder prediction 1 32 - -
Aev01g2407 725 SMART PB1_new 272 349 IPR000270 GO:0005515
Aev01g2407 725 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2407 Aev-Chr1 27871282 27873545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2407 25 148 Calmodulin-binding Proteins AT3G25230 30.435 2.48e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2407 - - gmx:100807387 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2407 01 27871282 27873545 Aev01g2407 01 27871282 27873545 ECH
Aev01g2407 01 27871282 27873545 Aev04g2137 04 19434544 19436791 PCT