Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2234 ATGGCAACACCATCTTCAATTGTAGAGCCAGAGCAGCAACAATCTGCTTATTCTTCATCATCATCATCATCAAGCTCTGGTGGTGGTGGTGCATGGAAGTCTTCTGGATCTGTTGGACCATTCTTCGCAGTGATATCAGTGGTTGCAATTCTTGCTGTGCTTTCTTGCTACTTGGGTCGGAGGTTGAATGGAAGGGCACCAACTCCATTGGAGAGCATCACAGGAGGGAGGGGCTGTTTTGGGTGGTTGAGGAGAATGTGTAGGCATTGTAGAAGCAGCAATGATGTTGAAGTTGGTGGGGTTGGGGCAAAGGTTATGGCTTGTAACAACATTGACAAACATCATGATCATGATGATGATCAATCCTGGTTCATTTTGTTCCATCATCATATTGATACTAACACTATGTCAAAGCTTCAAGTTCAACAACTCAACCAATTAAGAGAGATCTTTGCAAGATTTGACATGGATTCAGATGGAAGCTTAACAATGTTGGAGCTAGCAGCACTTCTAAGATCACTGGGGCTAAAGCCCTCAGGTGACCAAGTCCATGTCCTGTTATCCAAAATGGACTCAAATGGGAATGGATCGGTTGAATTTGATGAGTTGGTCAGAGCCATAATGCCTGACATGGATGCACAGGTGCTGCTGAACCAGGAGCAGCTACTAGGGATGTTCAAGTGCTTCGATCGCGACGGAAACGGTTACATATCGGCTGCTGAGTTAGCTGGTGCAATGGCCAAGATGGGTCAGCCATTGACATACAGAGAGCTTACTGAGATGATCAAAGAGGCTGACACTGATGGTGATGGTGTCATTAGTTTCAATGAGTTTGCAACTATTATGGCTAGGTCTGCATCTGATTTCTTAGGTGTTAAAGACAGAAGAGCCTGA 894 0.4497 MATPSSIVEPEQQQSAYSSSSSSSSSGGGGAWKSSGSVGPFFAVISVVAILAVLSCYLGRRLNGRAPTPLESITGGRGCFGWLRRMCRHCRSSNDVEVGGVGAKVMACNNIDKHHDHDDDQSWFILFHHHIDTNTMSKLQVQQLNQLREIFARFDMDSDGSLTMLELAALLRSLGLKPSGDQVHVLLSKMDSNGNGSVEFDELVRAIMPDMDAQVLLNQEQLLGMFKCFDRDGNGYISAAELAGAMAKMGQPLTYRELTEMIKEADTDGDGVISFNEFATIMARSASDFLGVKDRRA* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2234 297 CDD EFh 221 283 IPR002048 GO:0005509
Aev01g2234 297 ProSiteProfiles EF-hand calcium-binding domain profile. 253 288 IPR002048 GO:0005509
Aev01g2234 297 Pfam EF-hand domain pair 220 282 IPR002048 GO:0005509
Aev01g2234 297 Pfam EF-hand domain pair 145 207 IPR002048 GO:0005509
Aev01g2234 297 PANTHER CALCIUM-BINDING PROTEIN CML15-RELATED 138 293 - -
Aev01g2234 297 SUPERFAMILY EF-hand 136 284 IPR011992 -
Aev01g2234 297 ProSiteProfiles EF-hand calcium-binding domain profile. 217 252 IPR002048 GO:0005509
Aev01g2234 297 ProSiteProfiles EF-hand calcium-binding domain profile. 142 177 IPR002048 GO:0005509
Aev01g2234 297 ProSitePatterns EF-hand calcium-binding domain. 191 203 IPR018247 -
Aev01g2234 297 ProSitePatterns EF-hand calcium-binding domain. 155 167 IPR018247 -
Aev01g2234 297 PANTHER CALCIUM BINDING PROTEIN 138 293 - -
Aev01g2234 297 ProSitePatterns EF-hand calcium-binding domain. 266 278 IPR018247 -
Aev01g2234 297 Gene3D - 102 214 - -
Aev01g2234 297 Gene3D - 215 292 - -
Aev01g2234 297 ProSiteProfiles EF-hand calcium-binding domain profile. 178 213 IPR002048 GO:0005509
Aev01g2234 297 SMART efh_1 257 285 IPR002048 GO:0005509
Aev01g2234 297 SMART efh_1 221 249 IPR002048 GO:0005509
Aev01g2234 297 SMART efh_1 146 174 IPR002048 GO:0005509
Aev01g2234 297 SMART efh_1 182 210 IPR002048 GO:0005509
Aev01g2234 297 ProSitePatterns EF-hand calcium-binding domain. 230 242 IPR018247 -
Aev01g2234 297 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2234 Aev-Chr1 26572148 26575094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2234 143 293 EF-hand Containing Proteins AT1G18530 78.146 5.78e-85 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2234 K13448 - gmx:100795885 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2234 01 26572148 26575094 Aev01g2234 01 26572148 26575094 ECH