Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2225 ATGCCTACCGTGAGTGTGGGCCGCGATCGCCTGTTTGCAGCTATAGGAAGATCTTACACACAAGAGGAATTCGAAGACTTGTGCTTCAGTTTTGGAATCGAGCTGGATGACGTCACGACAGAGAAAGCGATTGTGAGAAAAGAAAAGCATTTGGAAGCTGAAGAAGAAGTTGACGAGGATGAAGAAGTTATCTACAAAATCGAAGTTCCCGCCAACAGATATGACTTACTATGTCTTGAAGGGCTTGCTCAGGCCCTTAGAGTGTTTTGTGAGAGCCAGGAGATTCCTACTTATAGATTGGCTGATGTTAGTAAAGATGCAATGCTCAAAATGCATGTGAAGCCGGAGACATCGTTGATTCGCCCGTTTGTTGTGTGTGCCGTATTGAGAGGTATAACATTTGATAAAGCTAGATACAACAGCTTCATTGATCTCCAAGATAAGCTTCACCAAAACATTTGTCGGCGAAGAACTCTTGTTGCCATTGGCACTCATGATCTGGATAAATTGGAAGGTCCTTTCACCTATGAGGCTTTACCACCTTCAAGTATAAATTTTACTCCACTAAAGCAGGAAAGGAGCTTTAGGGTGATGACTGATGGGTTCTACAGAACTGTTTTATCTTTACCCCCAATTATCAATGGCGCACATTCAGCCATCACTCTGGAGACAAAGAATGTGTTCATTGAATGTACTGCTACTGATCTGACAAAGGCAAAGATTGTTTTAAATACAATGGTAACAACCTTCTCAGAATATTGTAAAAATAAGTTCGTCATTGAACCAGTTGAAGTGATTTCATCTGATGGAAAGTCACAGATATACCCTGATTTATCTATCTACAATATGGAAGTTTCTCTGCCTTACATTAATGGATTGATTGGGGTGTCTTTGGAGGCGGAAGAGATCACTAAGCTCTTAAATCGGATGCAATTGCATGCCAAACAGTCTGCGCCTGACAATAAGCAGTGTAACATTGTTGTATCTGTACCCCCTACTAGAAGTGATATTCTTCACCCTTGTGATGTTATGGAGGATGTTGCAATTGCTTATGGATTCAATGCCATTAAGGATAAAGCAATAATAGACAATAAGGGCTCAAAGAGATTGGCTGCTTCCTTGACACTACTTCCTCTGAATGAGCTTAGTGATCTTATCAGGAAAGAGGTGGCAATGGTTGGGTTTACGGAGGTCTTAACATTCATACTTTGTTCTAAAAAGGAAAACTTTGCCATGCTAAACCGCAAAGATGATAAATCAAGAGCTGTCATCATTGGAAACCCTAGGTCTTCAGACTTTGAGGCTGTCCGGACTAGTCTTATGCCTGGCATCTTGAAAACCGTAGCTCACAACAAGGATCATCCAAAGCCCATAAAGATTTTTGAAGTGGGGGATATAGCAATTTTGGATGACAAAAAGGATGTTGGTGCAAAAAATCTTCGCCAACTTGCAGCACTATACTGTGGTGCAAATGCAGGATTTGAGATAGTTCATGGTTTGGTGGACAGAGTAATGGAAAAGACTGGGGTTCCCTTTGTTTCACCTGGTGATCAGTCAGGTTATTATATTGAGCGGTCAGATGAGCCTGAGTTTCTTGCTGGTAGACAAGCTAGAATCATTTACAAGGGCAATCACATCGGTACTTTTGGCATTGTTCATCCAGAGGTGTTAAACAACTTTGACATTCCTGATCCCTGCTCCTTCGTCGAACTTAACATTGAAAGCTTGTTATAA 1734 0.4129 MPTVSVGRDRLFAAIGRSYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLEAEEEVDEDEEVIYKIEVPANRYDLLCLEGLAQALRVFCESQEIPTYRLADVSKDAMLKMHVKPETSLIRPFVVCAVLRGITFDKARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPPSSINFTPLKQERSFRVMTDGFYRTVLSLPPIINGAHSAITLETKNVFIECTATDLTKAKIVLNTMVTTFSEYCKNKFVIEPVEVISSDGKSQIYPDLSIYNMEVSLPYINGLIGVSLEAEEITKLLNRMQLHAKQSAPDNKQCNIVVSVPPTRSDILHPCDVMEDVAIAYGFNAIKDKAIIDNKGSKRLAASLTLLPLNELSDLIRKEVAMVGFTEVLTFILCSKKENFAMLNRKDDKSRAVIIGNPRSSDFEAVRTSLMPGILKTVAHNKDHPKPIKIFEVGDIAILDDKKDVGAKNLRQLAALYCGANAGFEIVHGLVDRVMEKTGVPFVSPGDQSGYYIERSDEPEFLAGRQARIIYKGNHIGTFGIVHPEVLNNFDIPDPCSFVELNIESLL* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2225 577 Pfam B3/4 domain 121 255 IPR005146 GO:0003723|GO:0004826
Aev01g2225 577 Gene3D - 1 90 - -
Aev01g2225 577 Gene3D - 199 279 IPR020825 -
Aev01g2225 577 Gene3D - 102 198 IPR020825 -
Aev01g2225 577 Gene3D Bira Bifunctional Protein; Domain 2 377 577 IPR045864 -
Aev01g2225 577 SUPERFAMILY PheT/TilS domain 112 256 - -
Aev01g2225 577 Pfam Phenylalanyl tRNA synthetase beta chain CLM domain 378 573 IPR041616 -
Aev01g2225 577 SMART B5_2 280 353 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Aev01g2225 577 Gene3D - 281 356 - -
Aev01g2225 577 PANTHER PHENYLALANINE--TRNA LIGASE BETA SUBUNIT 204 576 - -
Aev01g2225 577 SUPERFAMILY Putative DNA-binding domain 282 357 IPR009061 -
Aev01g2225 577 PANTHER PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 204 576 IPR045060 GO:0004826|GO:0006432
Aev01g2225 577 ProSiteProfiles B5 domain profile. 278 358 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Aev01g2225 577 SMART B3_4_2 120 255 IPR005146 GO:0003723|GO:0004826
Aev01g2225 577 Pfam tRNA synthetase B5 domain 283 353 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Aev01g2225 577 SUPERFAMILY Putative DNA-binding domain 5 92 IPR009061 -
Aev01g2225 577 SUPERFAMILY Class II aaRS and biotin synthetases 350 576 IPR045864 -
Aev01g2225 577 TIGRFAM pheT_arch: phenylalanine--tRNA ligase, beta subunit 204 577 IPR004531 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Aev01g2225 577 CDD PheRS_beta_core 378 576 IPR041616 -
Aev01g2225 577 PANTHER PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 1 197 IPR045060 GO:0004826|GO:0006432
Aev01g2225 577 Pfam Phe-tRNA synthetase beta subunit B1 domain 1 90 IPR040659 -
Aev01g2225 577 PANTHER PHENYLALANINE--TRNA LIGASE BETA SUBUNIT 1 197 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2225 K01890 - gmx:100812830 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2225 01 26522297 26528054 Aev01g2225 01 26522297 26528054 ECH