LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev01g2189	ATGGCAACGCAGGAAGCAAGCCCTGCCACTACTCCCAGTGCTCAAGTTGTTGGCAATGCCTTTGTGGAGCAATATTACCACATTCTACACCAATCCCCAAACTTGGTGCACAGATTTTATCAGGATTCAAGTTTCTTAAGCCGATCAGACAGCAATGGTGTGATGACAACTGTGACAACAATGCAAGCAATCAATGACAAGATTCTTTCCCTGAACTGTGAAGATTATACAGCAGAGATAAAAACTGCTGATGCTCAGGAGTCATTCGAGAAAGGTGTGATAGTTTTGGTAACTGGATGCTTAACTGGGAAGGATAATGTGAGAAGGAAGTTCTCACAGACATTCTTTCTGGCTCCACAAGATAAGGGCTATTATGTCTTAAATGACGTCTTCAGGTACATTGAGGAGAATGACACACCCCAGTCAAATTCTGCCTCTGTAGATGTTGTCAATGAAAAAACTGAGGCAGTACCCGGGCCGGAAGCAGATCCTGCAGTTTCTGCAGAGGGTGAAAACCTTAATAATGGCGCCGAAGGTTATCATCCAGAGGACAATGAGGAAGAAGAATCAGTTATTGATGAAGAAGTTGCTGAACCCTCTGTGGATTTAAGTCAGAATGATGTTACAATTCAGGATTCAACTTCTACAGTTCAGGATGATGCACCAAAGAAATCATATTCATATGCATCAATTGTAATGAAAAGTAACACAGCATCTGGTCATGTCTATGTTCCCAGCCGAACTGTAAGAGCACCACCTCCTAAATCCAGTGAACAACTGCCTTCTACTGCCAAATCTACTCCTGGGCCAGAGTCGTTTGCTCCTAGTAGTGACAGTGCTCCTGGGAGTAGCGATGTTCATGAAGAAGCTAAAGGGCATTCCATATACATACGGAATTTGCCATATAATGCAACAGTTGAACAACTTGAGGAGATCTTTAAGAAATTCGGTCCTATTAAGCAAGGTGGAATCCAAGTTAGAAGTAGTAAGCACGGTTTCTGTTTTGGCTTTGTTGAATTTGAGGAACTGACTTCCATGAATAGTGCACTTGAGGCTTCACCTGTTACTGTTGGTGATCGACAGGCTGTTGTTGAGGAAAAGAGAACTACTACACGAGTCAGCGGTAGTGGGAGAGGGAGGTTTCCTTCCGCAAGAGGTGGGTTCCGAAGTGATAGTTTCAGGGGCCGCGGGAAGTTTGGTGGTGGCAGGGGCTATGGCAGAAGTGAATTCAGAAACCAAGGCGAGTTTGGAGGGCGGCCTAAGGGTCCTGCAGGACAGAAGGGAGATAGTTCTCAACGGCCAAGTCAGAACGGAGGCGGCCGAGGTGCACGCCAAGGTGTGGGAAACCGAAGTTCTGCACCATCAACTTAA	1371	0.4551	MATQEASPATTPSAQVVGNAFVEQYYHILHQSPNLVHRFYQDSSFLSRSDSNGVMTTVTTMQAINDKILSLNCEDYTAEIKTADAQESFEKGVIVLVTGCLTGKDNVRRKFSQTFFLAPQDKGYYVLNDVFRYIEENDTPQSNSASVDVVNEKTEAVPGPEADPAVSAEGENLNNGAEGYHPEDNEEEESVIDEEVAEPSVDLSQNDVTIQDSTSTVQDDAPKKSYSYASIVMKSNTASGHVYVPSRTVRAPPPKSSEQLPSTAKSTPGPESFAPSSDSAPGSSDVHEEAKGHSIYIRNLPYNATVEQLEEIFKKFGPIKQGGIQVRSSKHGFCFGFVEFEELTSMNSALEASPVTVGDRQAVVEEKRTTTRVSGSGRGRFPSARGGFRSDSFRGRGKFGGGRGYGRSEFRNQGEFGGRPKGPAGQKGDSSQRPSQNGGGRGARQGVGNRSSAPST*	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev01g2189	456	CDD	RRM_SF	295	352	-	-
	Aev01g2189	456	MobiDBLite	consensus disorder prediction	243	290	-	-
	Aev01g2189	456	ProSiteProfiles	Nuclear transport factor 2 domain profile.	17	133	IPR018222	-
	Aev01g2189	456	SUPERFAMILY	NTF2-like	13	134	IPR032710	-
	Aev01g2189	456	MobiDBLite	consensus disorder prediction	202	221	-	-
	Aev01g2189	456	MobiDBLite	consensus disorder prediction	182	196	-	-
	Aev01g2189	456	PANTHER	RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN	1	447	IPR039539	-
	Aev01g2189	456	PANTHER	RAS GTPASE-ACTIVATING BINDING-LIKE PROTEIN	1	447	-	-
	Aev01g2189	456	SMART	rrm1_1	294	365	IPR000504	GO:0003723
	Aev01g2189	456	MobiDBLite	consensus disorder prediction	140	221	-	-
	Aev01g2189	456	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	293	369	IPR000504	GO:0003723
	Aev01g2189	456	Gene3D	-	7	137	-	-
	Aev01g2189	456	Pfam	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	295	352	IPR000504	GO:0003723
	Aev01g2189	456	MobiDBLite	consensus disorder prediction	367	456	-	-
	Aev01g2189	456	SUPERFAMILY	RNA-binding domain, RBD	290	398	IPR035979	GO:0003676
	Aev01g2189	456	CDD	NTF2	13	135	IPR018222	-
	Aev01g2189	456	MobiDBLite	consensus disorder prediction	252	283	-	-
	Aev01g2189	456	Gene3D	-	276	375	IPR012677	-
	Aev01g2189	456	Pfam	Nuclear transport factor 2 (NTF2) domain	17	133	IPR002075	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev01g2189	Aev-Chr1	26225271	26228356	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev01g2189	K24983		-	gmx:100801253	641.728

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev01g2189	01	26225271	26228356	Aev01g2189	01	26225271	26228356	ECH