Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2178 ATGGGTTTCTCCGCTTTCATCGTCTTGGCATTCCTGGGAGGTGAAATCTCCTTATTCCTGATCCAGCATTTTAACGCCCCTATTGATTGCGTTACTTTTTTCCTTGCTCTGTATAATTTTGCTGTTGTTGGTGTTCTTGCTGTGTTCATGTCGAAAATTCCGATACTTGTGACTCAAGGGTACTTGGTTGTTATTGGGATTTTGGTTGCTTATTGGTTTACCATGTTGCCTGAGTGGACCACTTGGGCCATGCTTGTTGCCATGGCTTTGTATGATCTTGCTGCTGTTCTTTTGCCTATTGGGCCATTGAGGCTTCTTGTTGAGCTTGCGATTTCGAGGGATGAAGAGATCCCAGCACTGGTTTATGAGGCTAGGCCTGTGAATATTGAGAATTTGAATCCAAGGAGTGGTGTTAATCAGAGGAGGATGTGGAGAGATAGGACGGTTGTTGAGAATCCCAATCTCTTGAGTGGTGGTCATGCCATTAGTGGTGAATTGAATACCAATTCGGATGCAAATGCAGTTTCTGGTTCGAATTCAGAGAGGAATGCCCCGGTTGGTGTTCATGGTGAGAGTAATTTGGCTGGGGAGGATAATGTTTCGAATTCAAATTTGAGGTCTGGTACTTCTTATGGGATCTATAGTGATGGGAATTTGGTCAGAGCTGAAGAGGGGCGGGTTCAGGAAACTGAATCGGAGGTTACTACTCCCTTGATTGGTCATGGAATGAATGTAAGGATCCGGAGAGTGGAAGACTCCGCCTTGGATGAGAATTTGATCCTAGAGGGAATCGGATTGGGTTCATCTGGCGCAATCAAGCTAGGGCTAGGAGATTTTATCTTCTATAGCGTCTTGGTTGGCAGGGCAGCCATGTATGATTTTATGACAGTGTATGCATGTTATCTCGCTATCATTGCCGGTCTGGGAATAACTTTGATGCTTTTGGCTTTATATCAGAAAGCTTTGCCTGCTCTTCCCGTGTCAATAGCACTGGGTGTTGTGTTTTATTTCTTGACCAGGCTATTACTTGAAGTATTTGTAGTACAATGTTCCATAAATCTCCTAATGTTTTAA 1074 0.4385 MGFSAFIVLAFLGGEISLFLIQHFNAPIDCVTFFLALYNFAVVGVLAVFMSKIPILVTQGYLVVIGILVAYWFTMLPEWTTWAMLVAMALYDLAAVLLPIGPLRLLVELAISRDEEIPALVYEARPVNIENLNPRSGVNQRRMWRDRTVVENPNLLSGGHAISGELNTNSDANAVSGSNSERNAPVGVHGESNLAGEDNVSNSNLRSGTSYGIYSDGNLVRAEEGRVQETESEVTTPLIGHGMNVRIRRVEDSALDENLILEGIGLGSSGAIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLMLLALYQKALPALPVSIALGVVFYFLTRLLLEVFVVQCSINLLMF* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2178 357 Gene3D Presenilin 265 349 IPR042524 -
Aev01g2178 357 PANTHER PRESENILIN 1 357 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aev01g2178 357 MobiDBLite consensus disorder prediction 173 203 - -
Aev01g2178 357 SMART psh_8 1 343 IPR006639 GO:0004190|GO:0016021
Aev01g2178 357 Pfam Presenilin 1 347 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aev01g2178 357 PRINTS Presenilin family signature 92 109 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aev01g2178 357 PRINTS Presenilin family signature 75 82 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aev01g2178 357 PANTHER PRESENILIN 1 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2178 Aev-Chr1 26053764 26054837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2178 1 357 Miscellaneous Gene Families AT2G29900 59.104 7.16e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2178 K04505 - gmx:100799643 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2178 01 26053764 26054837 Aev01g2178 01 26053764 26054837 ECH