Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2173 ATGGAGTCTGAGAAGAGTGAGAGTGGCACCAAAAGCGCCGGTGAACGGCGCGTGGGTTTACTTTTCGATGAGAGGATGTGTAAGCACGAAAACATGCGCGACGATTCCCATCCAGAGACTCCTAATCGGATTAGGGCTATTTGGAACAAGCTCCAAACCACTGGCATTACCGACAGATGTGTGATTTTGGATGCCAAAGAAGCTGAAGATAAATATATTTTGTCAGTGCATTCCCAAAATCATGTAAACCTGATTAAGAATATCAGCTCAAATTCACGGAGGCTTAAGATTGCATCAAAGTTGAATTCTATATACTTCAATGAAGGTTCATCAGAAGCTGCTTATCTTGCTGCTGGCTCTGCTATTGATGTTGTTGAAAGAGTGGCAAGCAGGGATTTGCATTCTGCTGTTGCCATTGTTAGGCCTCCAGGTCATCATGCAGAACATGGTGAAGCCATGGGATTCTGTCTATTCAACAATGTTGCAATTGCTGCAAGTTATCTCTTAAATGAAAGACCAGACTTAGGTGTAAAGAAAATTTTAATTGTTGATTGGGACGTCCATCACGGAAATGGTACTCAAAAAATGTTCTGGAATGATTCTCGGGTTTTATTCTTCTCCGTTCACAGGCATGAATTTGGGAGTTTCTATCCAGCTAATGATGATGGCTTTTATACCATGGTTGGAGAAGGAGCAGGTGCTGGATATACTATAAATGTGCCTTGGGAAAATGGGAGATGTGGTGATGCAGACTACTTTGCAGTATGGGACCACATTCTTCTGCCTGTTGCCAAAGAATTTAATCCAGACATAGTTATTGTTTCTGCTGGATTCGATGCAGCTATTGGTGATCCTCTTGGTGGATGTCGTGTGACACCATTTGGTTATTCTGTGATGTTGAAAAAGTTGATGGATTTCGCTGAAGGTAGAGTTGCACTGGTTTTAGAAGGAGGATATAATCTTGACTCTATTGCAAAGTCCATGCATGCTTGCGTGGAAGTTCTGCTAGAAAACTGCCCTATCATTGGATCCTCTGAGGCCTATCCATTTGAATCAACCTGGCGTGTGATTCAAGCGGTTCGCCAGGAGTTAAGTCCCTTTTGGCCTACACTTGCGAGTGAATTACCAGAAAAGTTAATTTCTCGGATGGCACCTCCTCCGCACACTCTTATCTCAAGCTCTGACTCTGAGACAGAGGATGACAAAGTTCGACTGAATTCAGAACTTGAAGAGCTTCTTCAGGATGTAATAAGGCCACTTTCTGAGCTGAAAGTTGGTGCAGATCAAGAGACTAATACTTCAAAATCTTGGCGGTCAGAATTGTCAAACAATTTTATATGGTATGCATCATATGGATCAAATATGTGGAAAGCAAGATTCTTGTGCTATGTCCAAGGTGGGCAGGTTGAAGGAATGAAAAAGCACTGTTCTGGTTCAGTCGACAAGGCCCCACCAGAGACAATCATGTGGAAGACTTTTCCTTGCCACATATTTTTTGGTCGTGATTATTCTCATTCATGGGGCCCTGGAGGTGTTGCATTTCTTAATCCCGAGAAAAACTTTCAGCACAAGACCTACATGTGTCTGTACAAGATTTCGCTGGAACAGTACAATGATATATTACTTCAGGAAAATGGTTTAAGCCTTAATGTGGATTCTCCTTTATTTGATATATCGGCCCTGAACGCCATCTCTGATAAGGAATTCAATGCTCAGGAGATTGAGGATGGTTGGTATGGCAATGTTGTCTACTTAGGAAAGGAACAGGATATTCCAATCATTACCATGACATGTTCGCCTTCTGATATCGAACGCTTCAAATCTGGGAAGCTGCCAGTACAAGTTCCTAGCGAAGCATATGCCAACACCTTGATTAGAGGACTTGTAGAGGGAAAACAACTCTCAGAGGTGGAAGCCAATGCTTACATAGAAGCTGCTGCAAAATCGTTAATTAGCACCACATAG 1965 0.4244 MESEKSESGTKSAGERRVGLLFDERMCKHENMRDDSHPETPNRIRAIWNKLQTTGITDRCVILDAKEAEDKYILSVHSQNHVNLIKNISSNSRRLKIASKLNSIYFNEGSSEAAYLAAGSAIDVVERVASRDLHSAVAIVRPPGHHAEHGEAMGFCLFNNVAIAASYLLNERPDLGVKKILIVDWDVHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPANDDGFYTMVGEGAGAGYTINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIVIVSAGFDAAIGDPLGGCRVTPFGYSVMLKKLMDFAEGRVALVLEGGYNLDSIAKSMHACVEVLLENCPIIGSSEAYPFESTWRVIQAVRQELSPFWPTLASELPEKLISRMAPPPHTLISSSDSETEDDKVRLNSELEELLQDVIRPLSELKVGADQETNTSKSWRSELSNNFIWYASYGSNMWKARFLCYVQGGQVEGMKKHCSGSVDKAPPETIMWKTFPCHIFFGRDYSHSWGPGGVAFLNPEKNFQHKTYMCLYKISLEQYNDILLQENGLSLNVDSPLFDISALNAISDKEFNAQEIEDGWYGNVVYLGKEQDIPIITMTCSPSDIERFKSGKLPVQVPSEAYANTLIRGLVEGKQLSEVEANAYIEAAAKSLISTT* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2173 654 Coils Coil 395 415 - -
Aev01g2173 654 PANTHER BNAA09G05590D PROTEIN 5 570 - -
Aev01g2173 654 Pfam Histone deacetylase domain 37 334 IPR023801 -
Aev01g2173 654 Gene3D Histone deacetylase domain 11 384 IPR037138 -
Aev01g2173 654 PANTHER HISTONE DEACETYLASE 5 570 - -
Aev01g2173 654 PRINTS Histone deacetylase superfamily signature 142 165 IPR000286 -
Aev01g2173 654 PRINTS Histone deacetylase superfamily signature 269 279 IPR000286 -
Aev01g2173 654 Gene3D - 432 650 - -
Aev01g2173 654 SUPERFAMILY Arginase/deacetylase 16 369 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2173 Aev-Chr1 26014298 26019968 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2173 K11406 - gmx:100788831 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2173 01 26014298 26019968 Aev01g2173 01 26014298 26019968 ECH
Aev01g2173 01 26014298 26019968 Aev08g2067 08 19776678 19778546 PCT