Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2167 ATGAATCCAGAGAAGTTCACACACAAGACCAATGAGGCCTTAGCAGGGGCACATGAGCTAGCAATGAGTGCTGGCCATGCCCAATTCACTCCCCTCCACCTTGCAACAGCTTTGATCTCTGATCCCACTGGCATTTTCTTCCAAGCAATCTCCAATGCCGGGGGCGAAGAATCGGCACGTGCGGCTGAGAGAGTCTTCAACCAGGCATTGAAGAAGTTACCTTGCCAATCACCAGCTCCTGATGAGATACCAGCAAGCACAAGCCTCATAAAAGCCATTAGAAGATCACAGGCACTTCAGAAATCAAGGGGTGACACTCATTTAGCAGTTGATCAGCTTATTCTTGGGGTTCTAGAAGATTCCCAAATTGGAGACTTGTTGAAAGAAGCTGGTGTTGCTGTAGCAAGGGTTAAATCAGAAGTTGAGAAGCTTCGGGGGAAGGAAGGGAAGAAGGTCGAGAGTGCTACAGGCGACACAACTTTTCAAGCACTGAAGACTTATGGTAGAGACCTTGTTGAGCAAGCTGGGAAGCTTGATCCTGTGATTGGTCGTGACGAAGAGATTAGAAGGGTTGTGAGGATCTTATCAAGGAGGACCAAGAACAACCCGGTTCTTATTGGAGAGCCAGGAGTAGGAAAAACTGCTGTGGTGGAAGGATTGGCACAAAGGATTGTGAGAGGCGATGTTCCTAGCAATCTTGCTGATGTTAGGCTCATTGCATTGGACATGGGTGCATTGGTTGCTGGTGCAAAGTATAGGGGTGAATTTGAGGAGAGGTTGAAGGCTGTTTTGAAAGAAGTGGAGGAGGCTGAAGGGAAGGTTATTCTGTTCATTGATGAGATCCATTTGGTTCTTGGGGCTGGTAGAACTGAAGGGTCAATGGATGCTGCTAACTTGTTCAAGCCTATGCTTGCTCGCGGCCAGCTTAGGTGCATTGGTGCCACCACACTTGAGGAGTATAGGAAGTATGTGGAGAAGGATGCTGCATTTGAAAGAAGGTTCCAGCAGGTCTATGTGGCTGAACCAAGTGTGCCTGACACTATTAGCATCCTTCGCGGACTTAAGGAGCGATATGAAGGTCATCATGGTGTTAGGATTCAGGATCGTGCTTTGGTTGTGGCAGCGCAATTGTCAAGTCGGTACATTACAGGGCGCCATCTTCCGGATAAGGCGATCGATTTAGTTGATGAGGCTTGTGCAAATGTGAGAGTTCAACTTGATAGCCAGCCTGAGGAAATTGACAACCTTGAAAGAAAGAGAATGCAGCTAGAAGTGGAACTTCATGCCCTGGAGAAAGAGAAGGACAAAGCTAGCAAAGCTCGGTTAGTAGAAGTGAGGAAAGAACTTGATGACTTGAGAGACAAGCTTCAACCTTTGATGATGAAGTACAGGAAAGAGAAGGAGAGGGTTGATGAGATTCGAAGACTCAAGCAGAAACGAGAGGAGCTCCTCTTTGCTCTACAAGAGGCCGAGAGACGATACGATCTAGCCAGAGCTGCAGATCTTAGATATGGGGCAATCCAAGAGGTTGAAGCTGCAATTCAACAGCTTGAAGGAAACACTGATCAGGAGAACTTGATGCTGACAGAAACTGTTGGACCAGAGCAGATAGCAGAAGTTGTGAGCCGCTGGACCGGCATTCCAGTGACCAGGCTTGGCCAAAATGAGAAGGAAAGGTTGATTGGCCTTGCTGATAGGTTACACAATAGAGTTGTGGGACAAGACCAAGCAGTTAATGCTGTTGCCGAGGCGGTGCTGAGATCAAGAGCTGGGTTAGGGAGACCTCAACAACCAACTGGTTCATTCCTTTTCTTGGGACCAACTGGAGTTGGTAAAACTGAGCTCGCAAAGGCTCTTGCTGAGCAGCTCTTTGATGATGAGAACCAGCTGGTGCGAATCGACATGTCTGAGTACATGGAGCAGCACTCGGTCTCACGATTGATTGGTGCACCACCAGGGTATGTTGGACATGAAGAAGGAGGTCAATTAACTGAAGCTGTGAGGCGAAGGCCTTATAGTGTGGTGCTTTTTGATGAAGTTGAAAAGGCTCATACATCTGTGTTCAACACTCTTCTTCAAGTTTTAGACGACGGAAGATTAACCGATGGCCAAGGCCGAACCGTGGACTTTAGAAACACTGTCATCATCATGACCTCTAACCTTGGTGCTGAACATCTCCTAACTGGACTATCAGGAAAATGTTCCATGCAAGTTGCTCGTGATAGAGTAATGCAGGAGGTGAGAAGGCATTTTAGGCCGGAATTGTTGAATCGACTCGATGAGATTGTGGTGTTTGATCCTCTTTCACATGACCAACTGAGAAAGGTTGCAAGGCTGCAAATGAAGGATGTCGCTAGCCGTCTCGCCGAGAGAGGAATTGCCATGGCAGTAACAGATGCAGCACTAGACTACATACTTGCAGAGAGCTATGATCCAGTTTATGGTGCTAGACCAATTAGGAGGTGGCTTGAGAGGAAGGTAGTGACAGAGCTTTCTAGAATGCTTGTGAGGGAAGAAATTGATGAGAACTCAACTGTTTACATTGATGCTGGGTCTAAAGGGAGTGACTTAGCATACAGAGTAGAGAAGAATGGAGGTGTTGTGAATCCAACAACAGGGCAGAAATCTGATATTTTGATTCAGATTCCAAATGGGCCAAGATCTGATGCTGCTTCTCAAACTGTCAAGAAGTTGAAGATTGAGGAGATTGATGAAGATGAAATGGAAGAGTGA 2733 0.4687 MNPEKFTHKTNEALAGAHELAMSAGHAQFTPLHLATALISDPTGIFFQAISNAGGEESARAAERVFNQALKKLPCQSPAPDEIPASTSLIKAIRRSQALQKSRGDTHLAVDQLILGVLEDSQIGDLLKEAGVAVARVKSEVEKLRGKEGKKVESATGDTTFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYEGHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMKYRKEKERVDEIRRLKQKREELLFALQEAERRYDLARAADLRYGAIQEVEAAIQQLEGNTDQENLMLTETVGPEQIAEVVSRWTGIPVTRLGQNEKERLIGLADRLHNRVVGQDQAVNAVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENQLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLTGLSGKCSMQVARDRVMQEVRRHFRPELLNRLDEIVVFDPLSHDQLRKVARLQMKDVASRLAERGIAMAVTDAALDYILAESYDPVYGARPIRRWLERKVVTELSRMLVREEIDENSTVYIDAGSKGSDLAYRVEKNGGVVNPTTGQKSDILIQIPNGPRSDAASQTVKKLKIEEIDEDEMEE* 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2167 910 CDD AAA 572 767 - -
Aev01g2167 910 Pfam AAA domain (Cdc48 subfamily) 598 762 IPR003959 GO:0005524|GO:0016887
Aev01g2167 910 PANTHER CHAPERONE PROTEIN CLPB3, CHLOROPLASTIC 4 862 - -
Aev01g2167 910 Gene3D - 551 767 IPR027417 -
Aev01g2167 910 ProSitePatterns Chaperonins clpA/B signature 1. 295 307 IPR018368 GO:0005524
Aev01g2167 910 Coils Coil 473 500 - -
Aev01g2167 910 SMART AAA_5 199 344 IPR003593 -
Aev01g2167 910 SMART AAA_5 598 769 IPR003593 -
Aev01g2167 910 Pfam C-terminal, D2-small domain, of ClpB protein 768 848 IPR019489 -
Aev01g2167 910 CDD AAA 182 337 - -
Aev01g2167 910 Pfam Clp amino terminal domain, pathogenicity island component 17 57 IPR004176 -
Aev01g2167 910 Pfam Clp amino terminal domain, pathogenicity island component 97 146 IPR004176 -
Aev01g2167 910 Gene3D - 768 863 - -
Aev01g2167 910 PANTHER ATP-DEPENDENT CLP PROTEASE 4 862 - -
Aev01g2167 910 Coils Coil 406 455 - -
Aev01g2167 910 Gene3D - 344 545 IPR027417 -
Aev01g2167 910 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 676 694 IPR001270 GO:0005524
Aev01g2167 910 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 709 723 IPR001270 GO:0005524
Aev01g2167 910 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 647 665 IPR001270 GO:0005524
Aev01g2167 910 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 602 620 IPR001270 GO:0005524
Aev01g2167 910 Pfam ATPase family associated with various cellular activities (AAA) 204 317 IPR003959 GO:0005524|GO:0016887
Aev01g2167 910 SUPERFAMILY Double Clp-N motif 4 157 IPR036628 -
Aev01g2167 910 Pfam AAA lid domain 344 443 IPR041546 -
Aev01g2167 910 ProSitePatterns Chaperonins clpA/B signature 2. 632 650 IPR028299 -
Aev01g2167 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 547 853 IPR027417 -
Aev01g2167 910 ProSiteProfiles Clp repeat (R) domain profile. 3 147 IPR004176 -
Aev01g2167 910 Gene3D - 3 148 IPR036628 -
Aev01g2167 910 Coils Coil 253 273 - -
Aev01g2167 910 Gene3D - 150 343 IPR027417 -
Aev01g2167 910 SMART ClpB_D2_small_2 768 859 IPR019489 -
Aev01g2167 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 546 IPR027417 -
Aev01g2167 910 Coils Coil 507 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2167 Aev-Chr1 25961213 25964435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2167 K03695 - egr:104426006 1615.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2167 01 25961213 25964435 Aev01g2167 01 25961213 25964435 ECH