Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2140 ATGGATCCGAATGAAGACCGATCCGAAATAGTGTTCTTCGACGTTGAAACCACCGTTCCGACCCGACCCGGCCAGCGCTACGCTATTCTTGAATTCGGAGCCATTCTGGTTTGCCCCAGGAAGCTCACGGAGCTCCGAAACTACTCCACACTGGTCCGACCCGCTGATCCTTCCCTCATCTCGCCGAAGTCGGAGCGTTGCAACGGCATCACCGCCGACGCCGTCGCAGAAGCTCCTTCTTTCGCCGACATCGCCGCCGTCGTTTACGACCTTCTCCACGGTCGCATTTGGGCGGGTCACAATATCTTAAGATTTGACTGTGTTCGCATCAGAGATGCGTTTGCTGAGGTTAATCTGCCAGCACCAGAGCCCAAGGGTGCCATTGACTCTTATGTCTTGTTAACTCAAAAGTTCGGAAGAAGAGCGGGTAACATGAAGATGGCTACTCTTGCTACATATTTTGGGCTTGGACAGCAGACACACAGGAGCTTAGATGATGTTCGGATGAATCTCGAAGTCCTCAAATACTGTTCAACCGTTCTATTCTTGGAGTCAAGCCTCCCAGATATATTCTTTGCAAATAGTTGGGTTTCTCCGAATGCTACTACTAGAAGTCGTAGTAATGGGAAATCTCCCTTAAATGGAGGCTCATCAAATATGAATAAGGATTCTGTATTGTTACCATCTTCCCCTGAAACTAAAGAAGAAAATCATCTAATATGTTCTCTTACAATAAGCAGTACGAACGGGGAAGCTGCAAATATTGCCAAACCTAATACAGTCCAAGCAGATACTTTTGACTTCCATGCTTTAGGTCATGAAATGCAAAGATCCATTCAGTCAGACGTTGCCATGGATGGAAAACCTATGCAAGAGTCACTTGATATGTCAACCTCATCTTTTGTGCCTTTGGGATCTAGTAGCTCCTTTGTTGTTTTACAACCAGACGAAATATCTATCCCTTCTATTCATGCATCTCTCGTTCCATACTTTACGGGCAGTCAAAAGATAGAGATAATGCACGATGGTTTCCACTTTCAGCTTCATTGTACTGGTTTGAAAGTACGGTTTGGAATAAGCACAAGGTTTGTTGATAGTGCTGGCCGGCCACGGTTGAGTTTTGTAGTTGATGCATCACCAAGTTTGTGTAAGGTTCTGGATGCATGTGACAGTGTTGTACAGAAGTTATCCGTGGATTCTGGCAGCAGCTCTGATTGGAAGCCAGTTGTTACTAGAAAAGAAGGCTTCTTCAACTATCCTACTGCCAGATTGCATATACCTACAGCAGTATGTGGAGACATGGCCATCTATGCCACAGAGATATATCAAAAAGAATCATCATCGGGCACCGTGCAACGACTTCTCTTCAGTAAGTTTGATGCTGCAGAACTGGATTCATTGTTCGTGCCTGGGACATTTATTGATGCACTCTTCTCCCTAGATCCATATGACTATCAGCAGAATGCAGGGATCAAATTAGTTGCCAAAAAATTGATCATTCATTGCAAGTAG 1512 0.4511 MDPNEDRSEIVFFDVETTVPTRPGQRYAILEFGAILVCPRKLTELRNYSTLVRPADPSLISPKSERCNGITADAVAEAPSFADIAAVVYDLLHGRIWAGHNILRFDCVRIRDAFAEVNLPAPEPKGAIDSYVLLTQKFGRRAGNMKMATLATYFGLGQQTHRSLDDVRMNLEVLKYCSTVLFLESSLPDIFFANSWVSPNATTRSRSNGKSPLNGGSSNMNKDSVLLPSSPETKEENHLICSLTISSTNGEAANIAKPNTVQADTFDFHALGHEMQRSIQSDVAMDGKPMQESLDMSTSSFVPLGSSSSFVVLQPDEISIPSIHASLVPYFTGSQKIEIMHDGFHFQLHCTGLKVRFGISTRFVDSAGRPRLSFVVDASPSLCKVLDACDSVVQKLSVDSGSSSDWKPVVTRKEGFFNYPTARLHIPTAVCGDMAIYATEIYQKESSSGTVQRLLFSKFDAAELDSLFVPGTFIDALFSLDPYDYQQNAGIKLVAKKLIIHCK* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2140 503 CDD DEDDh 11 175 - -
Aev01g2140 503 MobiDBLite consensus disorder prediction 201 233 - -
Aev01g2140 503 Gene3D - 3 180 IPR036397 GO:0003676
Aev01g2140 503 SUPERFAMILY Ribonuclease H-like 8 178 IPR012337 -
Aev01g2140 503 PANTHER PROTEIN NEN3 5 502 - -
Aev01g2140 503 Pfam Exonuclease 11 174 IPR013520 -
Aev01g2140 503 SMART exoiiiendus 9 183 IPR013520 -
Aev01g2140 503 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 5 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2140 Aev-Chr1 25762192 25765877 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2140 - - ccaj:109808157 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2140 01 25762192 25765877 Aev01g2140 01 25762192 25765877 ECH