Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2125 ATGGCGGCAGCAGCATCAGCAGCTACCTTCACTGTTGGAACCGCCGCTTCCCTTGGCCAAAGAGGGACAACCTCACTCCCACAATCGAAGCCTCTTGGGCTGAAATTCAGCTCCCAGAATCATCTCAAGAGCTTCTGTGGCCTCAAGGCCTCATCATCTGTGAGATTCGACACCGAATTGTCCTTCTCAGGGAAGGATACCGGTGCTGCCCTGAGGGCTTCTTTTGCAACCAAGGCCCAAAAGGAAAACACAACTATCCAATACAACTTGCAGCCTCAGGCTTCATTCAAGGTGGCAGTTCTTGGTGCTGCCGGAGGCATTGGCCAGCCTCTGTCACTGCTTATCAAGATGTCGCCGCTGGTTTCCGACCTGCATCTCTATGATATTGCGAATGTCAAGGGTGTTGCTGCTGATCTCAGTCACTGCAACACCCCCTCCCAAGTTAAGGATTTCACAGGAGCTTCTGAGCTGGCTAATTGCTTGACGGGTGTGGATGTTGTTGTCATACCTGCTGGAGTTCCAAGGAAGCCTGGCATGACTCGCGATGACTTGTTTAATATCAATGCTGGCATTGTAAGGGACTTGGTTTCGGCTGTTGCGGACAATTGCCCCGGTGCTTTCATTCACATCATCAGTAACCCTGTGAACTCCACTGTGCCTATTGCGGCCGAGGTTCTGAAGCAGAAGGGTGTCTATGATCCTAAGAAGCTCTTTGGTGTTACTACATTGGATGTTGTGAGGGCAAACACATTTGTTGCTCAGAGGAAGAACCTGAAGCTTATTGATGTTGATGTCCCTGTTGTTGGAGGCCATGCTGGGATCACCATACTTCCTCTGTTGTCAAAGACGAGACCCTCGGTGAGCTTCACTGATGAAGAAATTGAAGAGCTGACTGTCAGGATTCAGAATGCTGGAACAGAAGTTGTTGAGGCTAAGGCAGGTGCAGGGTCTGCTACTCTGTCAATGGCATATGCAGCTGCTAGATTTGTCGAGTCATCTCTCCGTGCACTTGATGGAGATGGAGATGTGTATGAGTGCTCATTTGTGCAATCAGACCTGACTGAGCTTCCATTTTTCGCCTCGAGGGTGAAACTCGGTAGGAAAGGAGTTGAGGCTTTGATTCCATCTGACCTCCAAGGGTTGACTGAATATGAGCAGAAGGCTTTGGAAGCACTTAAGGCGGAACTTAAGGCCAGCATCGACAAGGGAATTGCTTTTGCTCAGAAGCAAGCAGTTGCAGCTTAA 1245 0.4972 MAAAASAATFTVGTAASLGQRGTTSLPQSKPLGLKFSSQNHLKSFCGLKASSSVRFDTELSFSGKDTGAALRASFATKAQKENTTIQYNLQPQASFKVAVLGAAGGIGQPLSLLIKMSPLVSDLHLYDIANVKGVAADLSHCNTPSQVKDFTGASELANCLTGVDVVVIPAGVPRKPGMTRDDLFNINAGIVRDLVSAVADNCPGAFIHIISNPVNSTVPIAAEVLKQKGVYDPKKLFGVTTLDVVRANTFVAQRKNLKLIDVDVPVVGGHAGITILPLLSKTRPSVSFTDEEIEELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDGDVYECSFVQSDLTELPFFASRVKLGRKGVEALIPSDLQGLTEYEQKALEALKAELKASIDKGIAFAQKQAVAA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2125 414 PANTHER MALATE AND LACTATE DEHYDROGENASE 28 414 - -
Aev01g2125 414 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 91 240 IPR036291 -
Aev01g2125 414 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 97 408 IPR010097 GO:0006099|GO:0030060
Aev01g2125 414 PANTHER MALATE DEHYDROGENASE, GLYOXYSOMAL 28 414 - -
Aev01g2125 414 Gene3D - 94 240 - -
Aev01g2125 414 Gene3D - 241 412 IPR015955 GO:0003824|GO:0016616
Aev01g2125 414 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 241 406 IPR022383 GO:0016616
Aev01g2125 414 SUPERFAMILY LDH C-terminal domain-like 240 407 IPR015955 GO:0003824|GO:0016616
Aev01g2125 414 Pfam lactate/malate dehydrogenase, NAD binding domain 97 239 IPR001236 GO:0016491
Aev01g2125 414 CDD MDH_glyoxysomal_mitochondrial 96 407 IPR010097 GO:0006099|GO:0030060
Aev01g2125 414 ProSitePatterns Malate dehydrogenase active site signature. 240 252 IPR001252 GO:0006108|GO:0016615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2125 Aev-Chr1 25661849 25663093 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2125 K00026 - gmx:100783173 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2125 01 25661849 25663093 Aev01g2125 01 25661849 25663093 ECH