Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2118 ATGCCCATTAGGAATTTGACTTCTTGGAATGTGATGCTTGCAGGTTACGCTAAAGCAGGTGAGCTTGAGTTGGCAAGGAGAGTTTTTTCAGAGATGCCTCTGAAGAATGATGTTTCTTGGAGCACCATGATTGTTGGGTTTGCTCATAACGGTTCTTTTGATGAGGCTTTTGGGTTTTTCAGGGAGTTACTGCGTGAGGGAATCAGGCCAAACGAGGTGAGCCTTACTGGGGTGTTGTCTGCTTGTGCACAAGCTGGGGCATTTGAGTTTGGGAAGATTTTGCATGGATTTATGGAGAAAGCTGGGTTTCTTCATATTGTTACTGTGAACAATGCTCTGATAGATACCTACTCAAAGTGTGGGAATGTGGCCATGGCTAGGTTGGTGTTTCAGAATGTGCCGGTGGCGAGGAGCCTTGTGACTTGGACATCGATGATCGCAGGCCTTGCAATGCATGGTCATGGAGAAGAGGCAGTACAGCTTTTCCATGAGATGGAAGAGTGTGGAGTTAGGCCAGATGGAATTACCTTCATCTCTCTGCTATATGCTTGTAGCCATAGTGGCATGGTTGAGGAAGGGTATGCTTATTTTTCTAAGATGAAGACTATGTATGGTATTGAACCTGCTATTGAGCATTATGGTTGTATGGTTGATATATATGGTCGGGCTGCTAGGTTGCAGAAGGCCTATGAATTTGTATGTCAAATGCCAGTTTCACCTAACGCAATCATTTGGAGGACGCTCCTTGGTGCTTGCAGCATTCATGGTAACATTGAACTGGCAGAGCTTGTGAAGGCAAGGCTTACAGAAATGGATCCAAACAACTCCGGTGACCATGTACTGCTCTCAAATGTGTATGCTGTTGCAGGGAAATGGAAGGATGTTGCCAGCATTAGAAGAACAATGACCGAACAGAGCATGAAAAAAACACCTGGATGGAGCATGATTGAAATTGACAAGGCCATTTATGGTTTTGTGGCAGGTGAAAAGCCTAACGATGTCACAGAAGAGGCTCATAAAAAACTGAGGGAAATAATGCTGAGACTCAGAGCAGAAGTAGGCTATGCACCACAGGTAACTAGTGTCTTGCATGATATTGAAGAGGAAGAAAAACAAGATTCAGCGTCTAAGCACAGTGAGAAGCTTGCAGCAGCATTTGGAATAGCAAAACTTTCTGAGGGAAGGGTTTTAAGAATAGTGAAGAACCTGAGGGTTTGTGGGGACTGTCATAATTTCATGAAGCTGGTTTCTAAAGTTTATCAAGTAGAAATCATTGTGAGAGATAGAAGCCGCTTCCACTCATTCAAAGATGGTTTGTGTTCTTGCAGAGATTACTGGTGA 1341 0.4392 MPIRNLTSWNVMLAGYAKAGELELARRVFSEMPLKNDVSWSTMIVGFAHNGSFDEAFGFFRELLREGIRPNEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLHIVTVNNALIDTYSKCGNVAMARLVFQNVPVARSLVTWTSMIAGLAMHGHGEEAVQLFHEMEECGVRPDGITFISLLYACSHSGMVEEGYAYFSKMKTMYGIEPAIEHYGCMVDIYGRAARLQKAYEFVCQMPVSPNAIIWRTLLGACSIHGNIELAELVKARLTEMDPNNSGDHVLLSNVYAVAGKWKDVASIRRTMTEQSMKKTPGWSMIEIDKAIYGFVAGEKPNDVTEEAHKKLREIMLRLRAEVGYAPQVTSVLHDIEEEEKQDSASKHSEKLAAAFGIAKLSEGRVLRIVKNLRVCGDCHNFMKLVSKVYQVEIIVRDRSRFHSFKDGLCSCRDYW* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2118 446 Pfam E motif 255 317 IPR046848 -
Aev01g2118 446 PANTHER OS01G0913400 PROTEIN-RELATED 1 387 - -
Aev01g2118 446 Pfam PPR repeat family 35 83 IPR002885 -
Aev01g2118 446 Pfam PPR repeat family 139 185 IPR002885 -
Aev01g2118 446 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 138 172 IPR002885 -
Aev01g2118 446 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 36 70 IPR002885 -
Aev01g2118 446 PANTHER - 1 387 - -
Aev01g2118 446 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 5 35 IPR002885 -
Aev01g2118 446 TIGRFAM PPR: pentatricopeptide repeat domain 38 72 IPR002885 -
Aev01g2118 446 TIGRFAM PPR: pentatricopeptide repeat domain 8 39 IPR002885 -
Aev01g2118 446 TIGRFAM PPR: pentatricopeptide repeat domain 175 208 IPR002885 -
Aev01g2118 446 TIGRFAM PPR: pentatricopeptide repeat domain 140 173 IPR002885 -
Aev01g2118 446 Gene3D Tetratricopeptide repeat domain 1 90 IPR011990 GO:0005515
Aev01g2118 446 Pfam DYW family of nucleic acid deaminases 354 446 IPR032867 GO:0008270
Aev01g2118 446 Pfam PPR repeat 8 33 IPR002885 -
Aev01g2118 446 Pfam PPR repeat 212 237 IPR002885 -
Aev01g2118 446 Gene3D Tetratricopeptide repeat domain 204 384 IPR011990 GO:0005515
Aev01g2118 446 Gene3D Tetratricopeptide repeat domain 91 203 IPR011990 GO:0005515
Aev01g2118 446 Coils Coil 332 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2118 Aev-Chr1 25610055 25611395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2118 5 446 Glycoside Hydrolase AT3G49170 39.238 3.61e-112 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2118 - - gmx:106796767 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2118 01 25610055 25611395 Aev01g2118 01 25610055 25611395 ECH