Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2107 ATGTTGGGGGGTCCAACCTTTATCGTTCCAAGGGATGTGCCCAACTCTTATGAGGAAGAGAACCGGTGGATTTTCAACACTTTCCGCGTAATGGAGCAGTCAAACAATAAGCGCCAGCTGGAGATAGAAGAGAACCAAATTGTGTCAACCAAGTCCTCCAAACTCTCACATGATCCAGAGGAAGAGGAAGCAGAGAAGAGTCTACTTTTTCTTTTTTATACCCCTGACCAAATCTATGATGAGCAGAATTATGCAGATTTTCTATCAGACACATATCCTCTGATTGATAAACTCGGTAGGGACACCACAATCACTTGTCTCCTGCAGTGCTCGAGGTCTGATTATGGCTCAATTGCCTCCTTGAACCGCAGTTTTCGCTCTCTCATCCGGTCCGGAGAGATATATAAGCTCAGAAGACAGATGGGAATTGTAGAACATTGGGTTTACTTCTCTCGCAGTGTCTTTGAATGGAATGCATTTGATCCGAATCGAGGTCGATGGATAACCTTGCCTAGATTGCCTTGTGATGATTGCTTTGTATGTTCTGATAAGGAGTCATTAGCCGTTGGAACAGAACTTCTTGTTTTCGGAAGGGAAATAATGTGTCAAATTGTTTTCAGATACAGCCTCTTAACAAACAAATGGTCATATGGTACTGAAATGAGCAACCCCAGATGCTTATTTGGTTCTGCTAGCCTTGGAGAAATCGCCATTTTTGCTGGTGGTTGTGATGCATATGGCAGGACCTCTGATGTGGCTGAGCTTTACAATTCAGATACCAGAACATGGGAGACACTTCCAAGCATGAACAAGGCAAGGAGAATGTGTTCCGGTGTGTTTATGGATGGGAAATTCTATGTGATTGGAGGGACCGGAACCGGAGAAGAAAAGCAGCTAACATGCGGCGAGGAGTTTGATCTCAAGACAAGAAAATGGCGTGAAATTCCCAACATGTTCCCTCGACCTCCAGAACAAGAGGACTATCTGATGAGCTGGGGTAATCCTGAGGCGCCTCCATTGGTTGCAGTTGTGAATAATGAATTGTATTCTGCAGATTATGCAAGTCAGGAGGTAAGGAGATATGTTAAACACAGCAATTCATGGATTAGCATTGGAAAACTTCCTCAGAGAGCAGAATCAAGCAACGGCTGGGGATTAGGCTTTAAAGCCTGTGGAGATAAACTGATTGTGATTGGTGGGGAGAAGCGTTCTTACTCCACCTTGTTAGAGCTTAATGCTTGGGCCCCTGATCGTGGCGGCGAACCGGAGTGGAAGTTGCTAGCTACCAGCGAAACCGGCAACTTTGTTTTTAATTGTGCTGTCATGGGATGCTGA 1335 0.4494 MLGGPTFIVPRDVPNSYEEENRWIFNTFRVMEQSNNKRQLEIEENQIVSTKSSKLSHDPEEEEAEKSLLFLFYTPDQIYDEQNYADFLSDTYPLIDKLGRDTTITCLLQCSRSDYGSIASLNRSFRSLIRSGEIYKLRRQMGIVEHWVYFSRSVFEWNAFDPNRGRWITLPRLPCDDCFVCSDKESLAVGTELLVFGREIMCQIVFRYSLLTNKWSYGTEMSNPRCLFGSASLGEIAIFAGGCDAYGRTSDVAELYNSDTRTWETLPSMNKARRMCSGVFMDGKFYVIGGTGTGEEKQLTCGEEFDLKTRKWREIPNMFPRPPEQEDYLMSWGNPEAPPLVAVVNNELYSADYASQEVRRYVKHSNSWISIGKLPQRAESSNGWGLGFKACGDKLIVIGGEKRSYSTLLELNAWAPDRGGEPEWKLLATSETGNFVFNCAVMGC* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2107 444 Pfam Kelch motif 224 270 IPR006652 GO:0005515
Aev01g2107 444 Pfam Kelch motif 272 318 IPR006652 GO:0005515
Aev01g2107 444 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 444 - -
Aev01g2107 444 SUPERFAMILY Kelch motif 150 406 IPR015915 GO:0005515
Aev01g2107 444 Gene3D - 134 443 IPR015915 GO:0005515
Aev01g2107 444 SMART kelc_smart 192 235 IPR006652 GO:0005515
Aev01g2107 444 SMART kelc_smart 237 283 IPR006652 GO:0005515
Aev01g2107 444 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2107 Aev-Chr1 25543588 25544922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g2107 95 317 EF-hand Containing Proteins AT4G39560 27.803 2.26e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2107 - - gmx:100788507 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1434 05 10646828 10648276 Aev01g2107 01 25543588 25544922 PCT