Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2063 ATGGTTTCCGATTCAATCACCACTGCTCCTATTCCTTCAGCTGCAAACACTAAGAACCTCGCCAAGAAGAAGAGGACCAATAGGTCGGCAAAATTGAAGCAGAACAAGATTGAAGCGCGTCGCGAGCAATGGCTATCTCAAGGTGCTGTCAAGAGCAAGGGGTGCAAGGATGGAGTCGAGAGTGACGGCCACGCCCCGCCAATGTCGGCAGGGAACCATGGCAAGCCTGCCAATGACAAGCACCAACATCAGCACCAACACCCTTGTCCCAATTCGCCTCCTGCACATGGTGATGAAGAAACCGTTGTGAAAACGGATTCTTCTTCACCTTGTGAAGTGGCAAATAATGGGTCGAGTTTAGGTGCTAGGAATTCGAATTCTGAGAGTGCTAGATTGGTCCCTTGGGGTACTACTGGTAATTGCAGAGCATGGAGGGCTGATGATGCATTTAGACCTCAGAGTTTGCCCAATTTGTCCAAACAGCACAGCTTGCCGGGCCGGCGGTGCGGTGGAGGGGTCCCTTGGGGCCGCACTGCTATGCCATCGTCGTGTCCGATATGCTGTGAGGATCTCGACTTGACGGACACGAGTTTCTTGCCTTGCTTGTGTGGGTTTAGGCTCTGCCTTTTTTGCCACAAGAGGATTCTCGAAGAGGACGGTCGGTGCCCTGGCTGCAGGAAGCCTTATGAGTGTGAAGCTGTTGTTGAGACAGAGCCTAGTGTGCTTGGAGGCAGCCTTACTCTTCGGTTGGCTCGTTCGTGTAGCATGATCGAAAGGTCTTGA 783 0.5249 MVSDSITTAPIPSAANTKNLAKKKRTNRSAKLKQNKIEARREQWLSQGAVKSKGCKDGVESDGHAPPMSAGNHGKPANDKHQHQHQHPCPNSPPAHGDEETVVKTDSSSPCEVANNGSSLGARNSNSESARLVPWGTTGNCRAWRADDAFRPQSLPNLSKQHSLPGRRCGGGVPWGRTAMPSSCPICCEDLDLTDTSFLPCLCGFRLCLFCHKRILEEDGRCPGCRKPYECEAVVETEPSVLGGSLTLRLARSCSMIERS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2063 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 241 IPR013083 -
Aev01g2063 260 MobiDBLite consensus disorder prediction 1 126 - -
Aev01g2063 260 ProSiteProfiles Zinc finger RING-type profile. 184 226 IPR001841 -
Aev01g2063 260 MobiDBLite consensus disorder prediction 1 15 - -
Aev01g2063 260 Pfam RING/Ubox like zinc-binding domain 184 230 - -
Aev01g2063 260 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 79 258 IPR039780 GO:0004842|GO:0030014
Aev01g2063 260 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 8 83 IPR039780 GO:0004842|GO:0030014
Aev01g2063 260 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 79 258 - -
Aev01g2063 260 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 8 83 - -
Aev01g2063 260 SUPERFAMILY RING/U-box 182 233 - -
Aev01g2063 260 MobiDBLite consensus disorder prediction 106 126 - -
Aev01g2063 260 CDD mRING-HC-C4C4_CNOT4 184 227 IPR039515 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2063 Aev-Chr1 25194797 25196117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2063 - - ahf:112695276 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2063 01 25194797 25196117 Aev01g2063 01 25194797 25196117 ECH