Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2041 ATGGCAGGACACAACAAACGTAAACGACCTCAAACAAAACCCAAAAGCCCCGCCCCCGAAACCCTAGACCTCCCCACAACCACTGCCCCCGCCGCCGCCAGTCCTTCCGCCATCGAAGACGTCGAGCTCATCGAAAGCACCTCTTCTCCTCACCTCCGCCGCCGAAGTCGCCGCCCCAAGAATGTTCCCAAAGACAGGGCTGCAGGGCGCCGTCCATCTCGTCCCGCCGTCGATGCCAACGGCGCTGCCGCCACAATCGAGGTGCCCGCGGTGGTGGCGGAGGACCCATCGGTGTGGGAGAGCGTGGCCGCGCGGGTTGTGCCGGCGATGGACTCGGTGGTGAAGGTGTTCTGCGTTCATACGGAGCCGAATTTCTCGCTGCCGTGGCAGCGGAAGAGGCAATACAGCTCGAGCAGCAGCGGGTTCGTGATTAGTGGTAGGAGGGTCCTCACGAATGCGCATTCTGTGGAGCATTACACTCAGGTGAAGCTCAAGAAGCGTGGTTCTGATACTAAGTACTTGGCGACTGTGCTCGCCATTGGAACCGAATGCGACATTGCCATGCTTACAGTTGATGATGACGAGTTTTGGGAAGGGATGTCACCTGTGGTGTTTGGGGATCTGCCCGCTCTTCAGGATGCAGTCACTGTTGTGGGATACCCGATTGGTGGAGACACTATTTCTGTGACCAGTGGTGTTGTATCACGCATTGAGATTCTATCTTATGTCCATGGTTCCACTGAACTTCTAGGTTTACAGATAGATGCTGCTATAAATTCTGGAAATTCCGGTGGGCCTGCATTTAGTGATAAAGGAAACTGTGTCGGGATTGCATTTCAGTCCCTCAAGCATGAAGATGCTGAGAATATAGGTTATGTTATTCCAACACCAGTTATCATGCATTTCATCCAGGATTATGAGAAGAATGGAAGATATACTGGGTTCCCTCTACTTGGGGTTGAGTGGCAGAAAACGGAAAATCCCGATCTACGAATGGCAATGGGCATGAGATCTGATCAGAAAGGTGTGCGGATTAGAAGAGTTGATCCTACTGCCCCTGAATCTAAGGTTTTGAAGCCATCAGATGTTATCCTTAGCTTTGATGGGGTTGATATTGCCAATGATGGAACAGTGCCATTTCGCCATGGAGAGCGCATTGGTTTTAGTTATCTCATATCCCAGAAATATACTGGGGATAAAGCAACAATTAAAGTGTTGCGAAATTCAAATATTCTCAAATTTGAGATTGAACTTGATAGTCACAGAAGACTCATTCCAGCACACAGCAAGGGCATGCCTCCCTCATATTATATAATCGCAGGACTTGTTTTTACAACTGTCTCAGTGCCATATCTTCGTTCTGAGTATGGAAAGGATTACGAGTATGAAGCACCGGTCAAGCTTTTGGACAAACTGCTGCATTCTATGCGGCAATCACCTGATGAACAACTTGTTGTGGTCTCGCAGGTGCTGGTGGCTGATATCAATATTGGATATGAAGATATTGTTAACACCCAGGTCCTTGAATTTAATGGTAAACCTGTTAAAAACCTAAAGAGCTTGGCTGATATGGTAGAGCGCTGTAACGATGAATACCTGAAATTTAATCTAGACTATGATCAGATAATGGTCCTTCGCACAAACACTGCAAAAGCAGCTACTCTAGATATTCTTGCAACACACTGCATTCCATCTGCAATGTCTGATGATCTTAAGCCGTGA 1722 0.4837 MAGHNKRKRPQTKPKSPAPETLDLPTTTAPAAASPSAIEDVELIESTSSPHLRRRSRRPKNVPKDRAAGRRPSRPAVDANGAAATIEVPAVVAEDPSVWESVAARVVPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVISGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWEGMSPVVFGDLPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFSDKGNCVGIAFQSLKHEDAENIGYVIPTPVIMHFIQDYEKNGRYTGFPLLGVEWQKTENPDLRMAMGMRSDQKGVRIRRVDPTAPESKVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDKATIKVLRNSNILKFEIELDSHRRLIPAHSKGMPPSYYIIAGLVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMRQSPDEQLVVVSQVLVADINIGYEDIVNTQVLEFNGKPVKNLKSLADMVERCNDEYLKFNLDYDQIMVLRTNTAKAATLDILATHCIPSAMSDDLKP* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2041 573 CDD PDZ_serine_protease 316 416 - -
Aev01g2041 573 Gene3D - 207 317 IPR043504 -
Aev01g2041 573 SUPERFAMILY PDZ domain-like 341 423 IPR036034 GO:0005515
Aev01g2041 573 Pfam PDZ domain 317 418 IPR001478 GO:0005515
Aev01g2041 573 Pfam Trypsin-like peptidase domain 140 277 - -
Aev01g2041 573 PANTHER - 32 572 - -
Aev01g2041 573 Pfam PDZ domain 425 570 IPR041517 -
Aev01g2041 573 Gene3D - 90 196 IPR043504 -
Aev01g2041 573 PANTHER PROTEASE DO-LIKE 9 32 572 - -
Aev01g2041 573 MobiDBLite consensus disorder prediction 1 81 - -
Aev01g2041 573 Gene3D - 318 423 IPR036034 GO:0005515
Aev01g2041 573 Gene3D - 424 573 IPR046449 -
Aev01g2041 573 SUPERFAMILY Trypsin-like serine proteases 108 311 IPR009003 -
Aev01g2041 573 PRINTS HtrA/DegQ protease family signature 169 189 IPR001940 GO:0004252|GO:0006508
Aev01g2041 573 PRINTS HtrA/DegQ protease family signature 211 235 IPR001940 GO:0004252|GO:0006508
Aev01g2041 573 PRINTS HtrA/DegQ protease family signature 248 265 IPR001940 GO:0004252|GO:0006508
Aev01g2041 573 PRINTS HtrA/DegQ protease family signature 357 369 IPR001940 GO:0004252|GO:0006508
Aev01g2041 573 PRINTS HtrA/DegQ protease family signature 141 153 IPR001940 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2041 Aev-Chr1 25029609 25034126 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2041 K25897 - gmx:100791040 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2041 01 25029609 25034126 Aev01g2041 01 25029609 25034126 ECH