Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2035 ATGGAGAGAGGCACACCCTCCACCACCACCACCACCACCACCGTGCGCGTGTCCAACATCCCCGTATACGCCACCGCCAACGACCTCGTCCGCTTCCTCGAAACCACCCTGGGCCCCGCCTCCGTCTTCGCCCTCGAGATCTTCTCCGACCAGAACAACGGCAACTGGAACTCACGCGGCTTCGGGCGCGTCCAGTTTGAGACCTCCGAAGCAAAAGCCCACGCGCTCTCCCTCTCCCACCACAACGAGCTCGTCTTCAGGTCACACATCCTCCACCTCTCTGAAACCCCCGAAGATGTAATCTCAAGGCCCGCCATTCCCTTTAACCGCGTCGAGAATGGGGTTCTGTACGCGGGCTTCATGGTCCGCGATGATCGCATGAGTGTGCTGGAGTCGTGGGAAGGGGTTAGGGGTTGGGTCATGCCCGAGAGGAGGAAGGTCGAGTTTTGGTTGATTCATGGTGAAGAAGTTTACAAGCTCGAGATTTGGTTTGAGGATGTTTTGGAGGCTAATTCCTATTGTTTGGGTGGTGGTGATAAACTCAATGCTCTGCTCTTGAAGCTGAAATATGCACCAAGGATTTATCAGAAGAAAGCTGGGCCTAAAATATTATCTAAGTTTACTACTGATAAGTACCACTATTGTAAGGAGGATTGTGATTTTCTTTGGGTGCGTACTACAGATTTCTCAGCTTTAAAGTCAATTGGACACTCTACATCGTTTTGTTGGGAAATTGAGGAAGAACCATTGGCTTCAGATATTTTTCAAAGTTTTCCACTCTACAGAGAAAATTTGAAAGATCTTATTCTGGAAGATGGGGAAGAATACTGTTCTAAAACAGAAACAGTTCCACTTGTAAAGTATTTTACAGATTCGAAGATACCGTATGAGACTCTTTTCCAGCTGAATTCGCTTGTTCATACCCAGAAAATTAGTCTTGCTTCAGTGGATAACGATTTGATTGACTTGTTCGGAAGTTTAGATGAAGAAACTAAAGCCATAATTTTTCAGAAATTGCACAAGCTGAGTTCCACTTGTTATGAGCCTCTAAAATATGCGAAGACTCAATTACATGTGCTAAGTAGCAATGGTAGAAAGCTTCAGCCATCATCAGAGAAAAGGTTGACAGATAATAACATAATGAGCTGTCATAGGGCCTTGATTACCCCGACAAAGATTTATTGCCTTGGTCCTGAGCTTGAAACCTCAAATCATGTGGTAAAGCATTTCGCACCATTTGCTTCAGACTTCATGAGAATTACTTTTGTTGAAGAGAATTGGGGTAAGCTTCCAGTTAATGCTGTATCAACTAGTTTGCGAAAGGGAATCTTTTCAGAAAAATTCAAAACTAAAATATACGAGCGGATATTGACTATCCTTCGAGATGGGATTGTAATTGGTTTGAAAAAGTTCGAGTTTTTGGCATTCTCTGCCAGTCAACTGCGATCAAATTCTGTTTGGGTGTTTGCTTCTAATGACAAGCTGAAAGCAGCAGATATCAGAGAATGGATGGGATGCTTCAACAATATTCGCAGTGTTTCTAAATGTGCAGCAAGGATGGGTCAGTTATTCAGTTCGTCCATGCAAACTTTTGAAGTGGCTGCTCACGATGTCGAGATAATTCCAGATATTGAAGTTAACTTTGATGATGGCATAAAGTACTGTTTCTCTGATGGTATTGGAAAAATTTCCCAATGTTTTGCAAAGGAAATCGCTGCAAAGTTGAAATTGGACAAGAGTCGGATCCCATCAGCATTTCAAATTCGGTTTGGTGGATACAAAGGTGTCATTGCTGTTGATCGCCATTCCTTTAGGAAGTTATCAGTGCGTAACAGTATGCTTAAGTTTGAATCCAAAAACAGAATGCTCTGTGTCACTAAATGGAGTGAATCAATGCCATGCTTTCTCAATAGGGAGATTATATCCCTGCTGTCTACCTTAGGAGTAAAAGATGAGGTGTTTTTGGCAATGCAGCAGGATCAATTGAATTTGCTGGGAAGGATGTTGACTGATAGTGAAGCGGCTTTGGATGTTTTGGAAACTCTAAGTGGTGCTAATTCAAAAAGCATTCTAGTGAAGATGCTGCGTGGATGTTATGAGCCAAACAGAGAACCTTACCTGGCCATGATGCTTAGGGCTCATTATGTGTTCCAACTATCCGATTTGAAAACTAGATGCCGAATACTTGTCCCCAAGGGTAAGATCTTAGTAGGTTGCTTGGATGAAACTGGTCTTCTGAACTATGGCCAAGTATTTGTCCGCATATCCGTGATGAACGGTAAGAAACAATTTGGAGATGAAAGCCTGAGGAAAGTGGATGACGATGATAGTACATGCACAGTAGTGGGGAAGGTGGTGGTAACAAAAAATCCTTGTCTTCACCCCGGTGACATAAGAGTCCTTGAAGCTGTGTACAATAAAGAACTAGAGGACAAAGGTTTGAGAGATTGCCTTGTGTTTCCACAAAAGGGACGAAGGCCTCATCCGAATGAGTGTTCGGGTGGCGATCTTGATGGAGATTTATTTTTCATAAGCTGGGACAAAGATATGATCCCTTGTGAGACTGATCCTCCGATGGATTACACAGGAAGGAGGCCTCGCCTAATGGACCATCAGGTTACGCAAGAGGAAATCCATCGGTTTTTTGTTGACTACATGATCAACGACACCCTTGGTGCTATCTCTACCGCACATTTGGTTCACGCTGATCGTGAACCAGAAAAGGCCAGGAGTCAGAAATGCCGGGAGTTGGCAGAGCTTCATTCCATGGCTGTTGACTTTGCGAAGACTGGAGCACCTGCTGAAATGCCGAGAATTCTGAAACCAAGAGTTTTTCCTGATTTCATGGAGAGGTTTGACAAGCCTATGTATATCTCCAAAGGGGTGCTAGGGAAACTTTATCGCGACATAACTGAGTTGAATTTGCAAGTAAGATCAAATGGTGCCTGGTCAGAGAAGCTTGCTGAAGAAGCTTATGATCATGATCATGAAGTCGGTGGTTTCGACGACTTTCTTGAGATCGCATTGAGTCACAGAGAGATGTATGCTCATAGGATTACCAGTTTAATGAACTTCTACGGTGCAGAGACCGAGGATGAATTGCTGACAGGTCACTTGCTGTACCGTGCTTCATATCTACAGCGTGATAACAGGAGATACGCCGATATGAAGGATCGGATTCTGCTCTCGGTCAGGGATCTTCAGCGCGAAGCCAAAGAATGGTTTGAAAGTAGTTGCGAGCCGCAGGAATATCAACGTTTGGCATCTGCATGGTATCATGTGACTTATCACCCAAGCTATTACCAAGAAGGCACCAATTTCTTAAGCTTTCCATGGATAGTAGGTGACGTATTACTGCACATCAAGTCTAAAAACAGTGCAGCTCATGAATAG 3393 0.4394 MERGTPSTTTTTTTVRVSNIPVYATANDLVRFLETTLGPASVFALEIFSDQNNGNWNSRGFGRVQFETSEAKAHALSLSHHNELVFRSHILHLSETPEDVISRPAIPFNRVENGVLYAGFMVRDDRMSVLESWEGVRGWVMPERRKVEFWLIHGEEVYKLEIWFEDVLEANSYCLGGGDKLNALLLKLKYAPRIYQKKAGPKILSKFTTDKYHYCKEDCDFLWVRTTDFSALKSIGHSTSFCWEIEEEPLASDIFQSFPLYRENLKDLILEDGEEYCSKTETVPLVKYFTDSKIPYETLFQLNSLVHTQKISLASVDNDLIDLFGSLDEETKAIIFQKLHKLSSTCYEPLKYAKTQLHVLSSNGRKLQPSSEKRLTDNNIMSCHRALITPTKIYCLGPELETSNHVVKHFAPFASDFMRITFVEENWGKLPVNAVSTSLRKGIFSEKFKTKIYERILTILRDGIVIGLKKFEFLAFSASQLRSNSVWVFASNDKLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTFEVAAHDVEIIPDIEVNFDDGIKYCFSDGIGKISQCFAKEIAAKLKLDKSRIPSAFQIRFGGYKGVIAVDRHSFRKLSVRNSMLKFESKNRMLCVTKWSESMPCFLNREIISLLSTLGVKDEVFLAMQQDQLNLLGRMLTDSEAALDVLETLSGANSKSILVKMLRGCYEPNREPYLAMMLRAHYVFQLSDLKTRCRILVPKGKILVGCLDETGLLNYGQVFVRISVMNGKKQFGDESLRKVDDDDSTCTVVGKVVVTKNPCLHPGDIRVLEAVYNKELEDKGLRDCLVFPQKGRRPHPNECSGGDLDGDLFFISWDKDMIPCETDPPMDYTGRRPRLMDHQVTQEEIHRFFVDYMINDTLGAISTAHLVHADREPEKARSQKCRELAELHSMAVDFAKTGAPAEMPRILKPRVFPDFMERFDKPMYISKGVLGKLYRDITELNLQVRSNGAWSEKLAEEAYDHDHEVGGFDDFLEIALSHREMYAHRITSLMNFYGAETEDELLTGHLLYRASYLQRDNRRYADMKDRILLSVRDLQREAKEWFESSCEPQEYQRLASAWYHVTYHPSYYQEGTNFLSFPWIVGDVLLHIKSKNSAAHE* 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2035 1130 SUPERFAMILY RNA-binding domain, RBD 5 91 IPR035979 GO:0003676
Aev01g2035 1130 CDD RRM_SF 15 84 - -
Aev01g2035 1130 Gene3D - 2 100 IPR012677 -
Aev01g2035 1130 Pfam RNA dependent RNA polymerase 388 970 IPR007855 GO:0003968
Aev01g2035 1130 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 7 1127 - -
Aev01g2035 1130 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 98 IPR000504 GO:0003723
Aev01g2035 1130 PANTHER RNA-DEPENDENT RNA POLYMERASE 7 1127 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2035 Aev-Chr1 25003093 25007955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2035 K11699 - gmx:100808274 1714.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2035 01 25003093 25007955 Aev01g2035 01 25003093 25007955 ECH