Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2020 ATGAATGTACAAAACCAGAATAATGTGAAAAAGTGTTGGAATGAAATAATTCTTATTGCTTTTGATGGATTCCAATTATCTCATAATAATGCATGGGAAGTGACGATGCCAAATATTGTTAGAAATGGAGATCATGAAGGGATCCATCAAGTGAAGGGGGGAATTGGGAAGCCTTCTTCCCACATTAGGAAACCCTCAATTGCTGACATGTCTCCCAGGAGTCCCTTGAGTCCGGAACGCCGCCACCGAGGTTCTTGCCCTAAAAATTCCATTGATCTAGACTCTGATAATGCCTGGGACATGCATAGCTCTGATCATTCACCCTCAATATTAAGCTTTGGATCCAATGGCGACGAGCCGAGGATCGATTCTGAAATTCCCAATCTTGTTAAGGTGAGGACACGTTTGGTGGAGAGAAAGATAGGAGGTGAAGCATCTCCTAGAATTGGCAGTCCATACAATTCTTTCACACCGAGAAAACCGGACAAAGCATCAATGTCACAATTGGGCCCTGAAGCACTAGCAAGATCTGCATCCAAGGTGAGGACTCCTACTTCAAAGCCTCCTGTTGATAGGAAGAATGAGAACCCTTTGAGGAAACAGTCCAGCTTGAACAAATCAACGAATTCTTCTCATGGGAGATCGAATTCGCAGAATCTAAGTGAGTTCTCGCCTCGTGCGGCATGCTCGCCTCGCGCGGCGTTGGCCCGGCCTGAGTTGGCACCACTTTTGCTAAAGCAAGCGAGGGACCTTATGTCATTAGGAGATAACCCTCAGAAGGCTCTTGAATCAGCTCTTCAAGCAGTGAAGCTGTATGAGAAAATTACTAACAATGGGAAGCAGAGTTTGGACTTTGTTATGTCCTTACATGTCACAGCAGCAATATATTGCTACTTGGGCCAGCACAATCAGGCGATTTCAATCATCGAGCGCTCGATCGTGATTCCTGTTATTGAGGAAGGCCTGCAGCATGCCCTTGCCAAATTTTCCGGTTACATGCAACTCGGAGACACATATGCTATGTTAGGCCAGCTTGAGAATTCAGTCATGTGCTACACCTCAGGGCTTGAACTTCAGAGGCATGTTTTGGGGGACACGGACCCAAGAGTTTGTGAAACTTGTAGGTATGTTGCTGAGGCCAATGTTCAAGCATTTCAATTGGATGAGGCAGAGAGGCTCTGCCAAATGGCATTAGATATTCACAAAGCAAATGGTTTGCCACCATCTCTCGAAGAGGCGGCCGATCGGAGGCTCATGGGGCTTATATGCGAAACAAAGGGAAATCACGAAGCAGCATTGGAGCATCTTGTGTTGGCAAGCATGGCAATGGTAGCAAATGGCCAGGAAGTTGAAGTGGCTTCTGTTGATTGCAGCATTGGAGACACATTCTCGTCCTTGGCTCGATACGATGAGGCGGTTATGGCTTATGAGAAAGCACTAAAAGTTTACAAGGCCAACAAGGGAGAGAATCACCCTGCTGTCGGATCGGTCTATGTTCGGTTGGCTGAATTGTATAACAGGACATGGAAGATAAAGGAATCGAAATCATATTGTGAGATTGCGCTTAGAATCTATGAGAATCCAATGCCTGATGTGCCTCCAGAGGACATTGCTAGTGGTCTCACAAATATCTCAGCTATCTACGAATCAATGAATGAGCTTGAAGAGGCACTCAAGTTGCTGCACAAGGCGCTCGCGATACTCAAAGGCGCTGCCGGCCAGAGAAGCACAATTGCAGGGATTGAAGCTCAGATTGGGGTCTTGAACTATGTGTTAGGGAACTATAGTGAATCCTACGACGCTTTCAAGAACGCTACATCAAACCTTCGCGCTGCTGGAGAGAAGAAAACGGCCTATTTTGGCATTGCTGTTAATCAAATGGGTCTTGCTTGTGTGCAGCTTGGTGATTTAAGTGAAGCTGCAGAGTTATTTGAAGAAGCAAAGGTTATCTTGGAGCAAGAATATGGACCATATCACGCTGAAACGCTTGGAGCTTATAGCAATCTTGCTGGCAGTTATGATGCAGTTGGAAGGGTGGATGATGCAATTGACATTTTGGAGTATATAGTAGACATGAGGGAGGAAAAGCTAGGGACAGCAAATGCAGAAGTTGTAGATGAGAAGAGAAGATTGGAAGAGTTGCTGAAGGAAACAGGAAGGGTTAGGGTCAGCAAAGCAAGGTCACTTGAGAAGCTTCTTGATTGCAATGTTGGTACTCTAAAGAAGCACCTTTTCATCTAG 2241 0.456 MNVQNQNNVKKCWNEIILIAFDGFQLSHNNAWEVTMPNIVRNGDHEGIHQVKGGIGKPSSHIRKPSIADMSPRSPLSPERRHRGSCPKNSIDLDSDNAWDMHSSDHSPSILSFGSNGDEPRIDSEIPNLVKVRTRLVERKIGGEASPRIGSPYNSFTPRKPDKASMSQLGPEALARSASKVRTPTSKPPVDRKNENPLRKQSSLNKSTNSSHGRSNSQNLSEFSPRAACSPRAALARPELAPLLLKQARDLMSLGDNPQKALESALQAVKLYEKITNNGKQSLDFVMSLHVTAAIYCYLGQHNQAISIIERSIVIPVIEEGLQHALAKFSGYMQLGDTYAMLGQLENSVMCYTSGLELQRHVLGDTDPRVCETCRYVAEANVQAFQLDEAERLCQMALDIHKANGLPPSLEEAADRRLMGLICETKGNHEAALEHLVLASMAMVANGQEVEVASVDCSIGDTFSSLARYDEAVMAYEKALKVYKANKGENHPAVGSVYVRLAELYNRTWKIKESKSYCEIALRIYENPMPDVPPEDIASGLTNISAIYESMNELEEALKLLHKALAILKGAAGQRSTIAGIEAQIGVLNYVLGNYSESYDAFKNATSNLRAAGEKKTAYFGIAVNQMGLACVQLGDLSEAAELFEEAKVILEQEYGPYHAETLGAYSNLAGSYDAVGRVDDAIDILEYIVDMREEKLGTANAEVVDEKRRLEELLKETGRVRVSKARSLEKLLDCNVGTLKKHLFI* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2020 746 ProSiteProfiles TPR repeat profile. 453 486 IPR019734 GO:0005515
Aev01g2020 746 Pfam Tetratricopeptide repeat 538 571 - -
Aev01g2020 746 MobiDBLite consensus disorder prediction 46 125 - -
Aev01g2020 746 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 73 736 - -
Aev01g2020 746 Coils Coil 697 717 - -
Aev01g2020 746 MobiDBLite consensus disorder prediction 200 225 - -
Aev01g2020 746 Pfam Tetratricopeptide repeat 331 360 IPR019734 GO:0005515
Aev01g2020 746 MobiDBLite consensus disorder prediction 143 225 - -
Aev01g2020 746 Gene3D Tetratricopeptide repeat domain 616 736 IPR011990 GO:0005515
Aev01g2020 746 SMART tpr_5 329 362 IPR019734 GO:0005515
Aev01g2020 746 SMART tpr_5 371 404 IPR019734 GO:0005515
Aev01g2020 746 SMART tpr_5 453 486 IPR019734 GO:0005515
Aev01g2020 746 SMART tpr_5 621 654 IPR019734 GO:0005515
Aev01g2020 746 SMART tpr_5 495 528 IPR019734 GO:0005515
Aev01g2020 746 SMART tpr_5 579 612 IPR019734 GO:0005515
Aev01g2020 746 SMART tpr_5 538 571 IPR019734 GO:0005515
Aev01g2020 746 SMART tpr_5 663 696 IPR019734 GO:0005515
Aev01g2020 746 Coils Coil 634 654 - -
Aev01g2020 746 Coils Coil 466 486 - -
Aev01g2020 746 MobiDBLite consensus disorder prediction 75 89 - -
Aev01g2020 746 ProSiteProfiles TPR repeat profile. 538 571 IPR019734 GO:0005515
Aev01g2020 746 SUPERFAMILY TPR-like 579 695 IPR011990 GO:0005515
Aev01g2020 746 SUPERFAMILY TPR-like 450 569 IPR011990 GO:0005515
Aev01g2020 746 Pfam Tetratricopeptide repeat 625 694 - -
Aev01g2020 746 Pfam Tetratricopeptide repeat 452 527 - -
Aev01g2020 746 Coils Coil 551 571 - -
Aev01g2020 746 Gene3D Tetratricopeptide repeat domain 440 615 IPR011990 GO:0005515
Aev01g2020 746 Gene3D Tetratricopeptide repeat domain 235 439 IPR011990 GO:0005515
Aev01g2020 746 PANTHER KINESIN LIGHT CHAIN 73 736 - -
Aev01g2020 746 SUPERFAMILY TPR-like 282 434 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2020 Aev-Chr1 24895746 24899214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2020 - - gmx:100791625 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2020 01 24895746 24899214 Aev01g2020 01 24895746 24899214 ECH
Aev01g2020 01 24895746 24899214 Aev08g2251 08 21683008 21685765 PCT