Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g2011 ATGCTGAGAATCGCCGCAAAGAGGATTTTGGCATCGCCGTCGACGGCAGTTAGGGTTCCGGCGCGGTTGTACCACGAGAGGGTGGTGGATCACTATAACAATCCCCGCAACGTTGGGTCGTTCGACAAGAATGACCCGACAGTGGGAACGGGTCTGGTCGGGGCACCAGCTTGCGGCGACGTCATGAAGCTGCAGATTAAGGTGGATGAGAAAACCGGCAAGATCGTCGATGCTCGCTTCAAGACCTTCGGTTGTGGCTCCGCCATTGCTTCTTCCTCTGTGGCTACTGAATGGGTAAAGGGAAAGCAAATGGAGGAAGTTTTGTCCATTAAAAACACCGAAATCGCAAAGCATCTTTCACTTCCACCAGTTAAGCTCCATTGCAGCATGCTTGCTGAAGATGCTATCAAAGCAGCTGTTAAAGACTACGAAGCTAAGCGCACCAAGTCAACTGGAAATGGAGATGCAACAACAGCGGATGATGCTGCCACTGCTTGA 498 0.5161 MLRIAAKRILASPSTAVRVPARLYHERVVDHYNNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDEKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRTKSTGNGDATTADDAATA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g2011 165 Gene3D - 23 164 - -
Aev01g2011 165 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 5 159 IPR002871 GO:0005506|GO:0016226|GO:0051536
Aev01g2011 165 MobiDBLite consensus disorder prediction 150 165 - -
Aev01g2011 165 TIGRFAM iscU: FeS cluster assembly scaffold IscU 24 147 IPR011339 GO:0005506|GO:0016226|GO:0051536
Aev01g2011 165 MobiDBLite consensus disorder prediction 146 165 - -
Aev01g2011 165 CDD IscU_like 23 139 IPR002871 GO:0005506|GO:0016226|GO:0051536
Aev01g2011 165 Pfam NifU-like N terminal domain 24 148 IPR002871 GO:0005506|GO:0016226|GO:0051536
Aev01g2011 165 SUPERFAMILY SufE/NifU 23 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g2011 Aev-Chr1 24824978 24826659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g2011 K22068 - gmx:100812566 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2011 01 24824978 24826659 Aev08g2262 08 21826746 21828938 PCT