Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1992 ATGTCATCACCACCAGTAAGGTACAATCATAACAGGGTTGTTAGAAGAATAACAAGCCTTCCAAGAAGCATAATTGGGGGTATCTCAAGAGCAATGGAAGATGGTATGAACTTAGCAGGAATAGGTAGAAGAAGAAATAACAACAACAACTTTAATCATCAGCATCCAAATTTTCATGCTCATCCTGCATCATTATCACCACAACATGATCCATTACTACTAGTTCCAGAGGAATGGGCATTTCTGAATTGTTTTGAGCAGCAATATGGCACCAATCATCCTTTCTTTTACGCTTGCCGTCTCGCCGAAGCCATGAAATTAGCTGAGCAGGATCACAAGTTCATGTTCATGTACCTTCACTCACAAGAAACCCCTTTTGCAGATGTTTTCTGTAAGGAGACTCTGTGTTCTGAGCTTGTGACAGAGTTTCTTGATGTGAATTTTGTTTGCTGGGGTGCACTTGCTGATAGAGCAGACGGTCTGCGAATGGCTGCGACGATGCGCCCTGCTTGTTTTCCTTGTTGTGCTGTCATGGCTCCATCCTCTGGTGATGGCATGACTGTTCTTCAACAGCTAGAGGGGCCACTTTCCCCAGCTGAGCTAGTGGAGATTCTGCAAAGAACATTGGAAGAACAAGGGGTGGCTTTTGGAAGTGATAAAGCTAAGCAGGAAGAGAAAATCAGAGCAGAGCATAGGCTTAGAGATCAAAAGATCCAAGCAGACCGTAGGCTTAGAGAAGAACAAGATGCTGCATATCTTACAGCTTTGCAAATAGACAAGGAAAAAGAAAAATACAAGAATTCTCCTTCAAGAGTGGGAGTTCAGAAGCCAATGGAAGCTCAGAATGCCAGAAATATTGGGAAGCTAAATACCAATTCTGTGAACATCACCAAACAGAATAATAGTAATAAAGTGAATGGGTCTATTGGCCATAAACAAGTAAATGGAATTGCAAGCAGAGGAAGTGACTCACAAGCCACACAGATATTGATTAGGTTTCCAAATGGGGAAAGAAGCGAACACACTTTCATGTGCAATGACAAAATCCAATCAATTTTCTCATACATTGATTCATTAGGTATGGCAGGAATTGGGAACTATAGACTGATAACAAACTTTCCAAGAAAAGCTTATGGTGTCGATCAAATGAGAATGACTCTCAAAGAAGCTGCCTTGTCTCCTAAAGCTAGCATGTTCCTCGAGCCTATATAA 1212 0.4158 MSSPPVRYNHNRVVRRITSLPRSIIGGISRAMEDGMNLAGIGRRRNNNNNFNHQHPNFHAHPASLSPQHDPLLLVPEEWAFLNCFEQQYGTNHPFFYACRLAEAMKLAEQDHKFMFMYLHSQETPFADVFCKETLCSELVTEFLDVNFVCWGALADRADGLRMAATMRPACFPCCAVMAPSSGDGMTVLQQLEGPLSPAELVEILQRTLEEQGVAFGSDKAKQEEKIRAEHRLRDQKIQADRRLREEQDAAYLTALQIDKEKEKYKNSPSRVGVQKPMEAQNARNIGKLNTNSVNITKQNNSNKVNGSIGHKQVNGIASRGSDSQATQILIRFPNGERSEHTFMCNDKIQSIFSYIDSLGMAGIGNYRLITNFPRKAYGVDQMRMTLKEAALSPKASMFLEPI* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1992 403 CDD UBX 329 401 - -
Aev01g1992 403 ProSiteProfiles UBX domain profile. 322 400 IPR001012 GO:0005515
Aev01g1992 403 PANTHER FAS-ASSOCIATED PROTEIN 8 402 - -
Aev01g1992 403 Gene3D Glutaredoxin 78 215 - -
Aev01g1992 403 SUPERFAMILY Ubiquitin-like 320 402 IPR029071 -
Aev01g1992 403 Pfam UBX domain 323 401 IPR001012 GO:0005515
Aev01g1992 403 SMART ubx_3 318 402 IPR001012 GO:0005515
Aev01g1992 403 SMART 45neu3 80 206 IPR006577 -
Aev01g1992 403 SUPERFAMILY Thioredoxin-like 75 213 IPR036249 -
Aev01g1992 403 Gene3D - 321 402 - -
Aev01g1992 403 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 8 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1992 Aev-Chr1 24681005 24683162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1992 K18726 - gmx:100775212 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1992 01 24681005 24683162 Aev01g1992 01 24681005 24683162 ECH