Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1979 ATGGGTAACCCAAACCCTAACCATGAAGAGGAGAAGAGCTTGCAGGAGGAGCTTTCAGGTCCCATCATGCTCGGCGACCGAGTCATCAAACTCGCTCAAGAGATTGAGTCATCCAAGGTGGTTGACTGCACCGAGATCGCCAAGAAGGTTCAGCTCCTCTGCGACAATCTCCGCTCCGCCGTGCGCGCCGCTTCCTCCACCACCCAGCCTCTCAACGAGCGACCCATCCGCCGCATCCTCGCCGATGTCTCCAAGACCCTCGACCGAACCCTCGCCCTCGTCCGCCGCTGCAAGCGACACGGCGGCGTCCTCCGCCAGGTCTTCTCCATCACCACCACCGCCGATTTTCGGAAGGTCATGAACCTTCTAGAATCTTCCAACGGAGACATGCTCTGGCTTCTCAGTATCTTCGACTCCAAAGGTACTAACCTCTCACTCCCACCTATTGCAAGCAACGACCCTATCCTCGCTTGGGTTTGGACCTATACTTATACCCTTCAACTGGGTACCCTTAAGGACCGTGCTGAAGCTGCAATTGAACTTGGTTCCCTTGCTAGGGACAATGACCGTAACAAGGTTATTATCTTGGATGAAGGTGGGGTTTTGCCGTTGTTGAAGCTTCTTAAGGAGAGTGCTTCCCCTGATGCTCAGGTTGCTGCAGCAAATGCTCTTGTTAGTGTTGCCACCAACCAGGAGAGGGTTGTGAGTTTCATTGTTAAGTCACTAGGGATCCCCATTATTGTGCAGGTTCTTGGTGATGCCCCGATGAGGGTTCGTGTTTCAGTTGCCAATTTGGTTGCCACCATGGCTGAGCAGGACCCTCTTGCTCAGGAGGAATTTGTTAGGGCTAATGTGACTAGGCCACTCGTGTCGTTGTTGTCCATAGATACGGTTCTTGCTGACCCTATGGCAGGCCGGGCCAGCATTCATTCGCTGGTTCTGAATTTGTCATCAGTGGGGGAGTCTTCGTCAGTCCCAGCGGCAGGGAATTCGGATGGGAGTAGCAGAGGAGTGGGGCAGTATAGGAAGGAGAAGGAGAAGGAGGTTGAGAGCCCAGAGTTGAGGAATGAGATCAAGGTGCGTTGTGCTAGGGCTCTGTGGAAACTCTCCAAAGGGTGTCTTTCGACTAGTAAGAAGATCACGGAGACTAAAGGTTTGCTTTGTCTGGCGAAGATCATTGAGTCTGAGAGTGGAGAGTTGCAGCTCAATTGTCTCATGGCTGTCATGGAGATTGCTGAGGTGGCCGAGTTCAATGCTGATCTTAGAAGAACTGCTTTCAAGCCTACTGCTCCGGCCGCGAAAGCAGTTTTGGATCAGCTTTTGAGAGTTGTCCGGGAAGGGAGCGATCCAGCATTGCAGATTCCTGCTATTAAGTCGATTGGATCGTTGGCCAGAAACTTCTCTGGGAAGGTTCCACATGTTCTTGGTCCTTTGGTTGCCCAACTTGGTAACAGAGATGTGGAGGTAGCAACTGAGGCTGTTGTTGCCTTGGGAAAATTTGTGTGCATCGACAACTACAACCGTGTTGACCATTCTAAGGCAGTACTTGAGCTTGATGGTGTTCCTAAGCTAATGAGTCTGCTGAAGATAAATAATGATCGTGCACAAATGCATGGGCTGATATTCCTTTGTTACCTTGCCTTGAATGTGGGCAATAGTAAGATTCTTGAGCAAGAGCGTGCCTTGAGTACTCTGGAGAAGCTCGCTCGTTCTGTTCTAGCTCAGCATCCTGAGTTGAGGGAGCTGTTAGCAAATGCCATACACCACCTCACTCTTTATCAGCCAGGAGCTCAATTGCACAGACAGCCATTGGGGCTATGA 1821 0.5129 MGNPNPNHEEEKSLQEELSGPIMLGDRVIKLAQEIESSKVVDCTEIAKKVQLLCDNLRSAVRAASSTTQPLNERPIRRILADVSKTLDRTLALVRRCKRHGGVLRQVFSITTTADFRKVMNLLESSNGDMLWLLSIFDSKGTNLSLPPIASNDPILAWVWTYTYTLQLGTLKDRAEAAIELGSLARDNDRNKVIILDEGGVLPLLKLLKESASPDAQVAAANALVSVATNQERVVSFIVKSLGIPIIVQVLGDAPMRVRVSVANLVATMAEQDPLAQEEFVRANVTRPLVSLLSIDTVLADPMAGRASIHSLVLNLSSVGESSSVPAAGNSDGSSRGVGQYRKEKEKEVESPELRNEIKVRCARALWKLSKGCLSTSKKITETKGLLCLAKIIESESGELQLNCLMAVMEIAEVAEFNADLRRTAFKPTAPAAKAVLDQLLRVVREGSDPALQIPAIKSIGSLARNFSGKVPHVLGPLVAQLGNRDVEVATEAVVALGKFVCIDNYNRVDHSKAVLELDGVPKLMSLLKINNDRAQMHGLIFLCYLALNVGNSKILEQERALSTLEKLARSVLAQHPELRELLANAIHHLTLYQPGAQLHRQPLGL* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1979 606 SMART arm_5 230 271 IPR000225 GO:0005515
Aev01g1979 606 SMART arm_5 508 548 IPR000225 GO:0005515
Aev01g1979 606 SMART arm_5 187 229 IPR000225 GO:0005515
Aev01g1979 606 SMART arm_5 549 592 IPR000225 GO:0005515
Aev01g1979 606 SMART arm_5 273 371 IPR000225 GO:0005515
Aev01g1979 606 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 9 604 - -
Aev01g1979 606 PANTHER ARMADILLO REPEAT ONLY 4 9 604 - -
Aev01g1979 606 Gene3D - 167 324 IPR011989 -
Aev01g1979 606 Pfam Armadillo/beta-catenin-like repeat 188 224 IPR000225 GO:0005515
Aev01g1979 606 MobiDBLite consensus disorder prediction 322 337 - -
Aev01g1979 606 Gene3D - 343 601 IPR011989 -
Aev01g1979 606 MobiDBLite consensus disorder prediction 322 348 - -
Aev01g1979 606 SUPERFAMILY ARM repeat 172 593 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1979 Aev-Chr1 24520965 24522785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1979 - - gmx:100813824 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1979 01 24520965 24522785 Aev01g1979 01 24520965 24522785 ECH
Aev01g1979 01 24520965 24522785 Aev08g2296 08 22218598 22223233 PCT