Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev01g1970 | ATGGATCCCCACCCAGGAACCTTCCCCGTCCTCTCCTACGTCATGTCCCGCCTCCCTTCCTTCGGCAGAGCCACCTCCTCCCCAACCGCCGCCACCACCACCACTACCACCACCCATTCCCAATTCGACATTGAACAACCCGAATCTTCCTCTTCCTCCTCCTCCTCCTCCCGCCACCACAACCACTCCGAAATCATAGGCCAAATGCCCCAATTAACGGACCCAGCCCTCCTCGAGTCCATGACACGCGCCATCACCGACGTCTCACAAGCCCGATCCGTCCTCAAACTCATCGGCGACAGACCCACCCACGAGGAAATCGACAACGCCAAAGCCAAGCTGGCGGACATCGACGCGCACCTCTCACGCCAGCTGGAGGAGATCGTGGCGCTGCAGAAGCCACCTGAGTCTTCCCCTGACACGTGGCGCGGCCACGTGGCTAAGAGGGAGAAGGAGTGTAGGGACTCCGCGGAGAGCGAGAAGCGCGTGTTCAAGTCGCTCATACAGCTCGATGAGATGCACGATGCGTACGCGAAGCTTCTAAGGGACGCGGAGAGTAGGTTGGTAAAGATTTATGAGCAGAGAGTGGAGGAAGATGATGAGGGTGGTGGTGGTGGAAGGGATGAGGTGAATGAACATGTTAAGGAGATTTTGGAGGAGGCTAATGTCAAAGGTGGTGTTGAGCGAGTTGACCTTTCTGGCCAGCACCTGAGGTACTTGCCGGAGGCATTTGGCCGCATTCAGAACTTGGTGGTTCTTCTTCTTTCCGGCAACCAGCTTTCGGTGATTCCTGACTCAGTAGCTGGATTGCAAAATCTTGAGGAGCTAAATGTGTCTTCAAATGTGTTGGAGTCACTGCCAGATTCAATTGGGTTGTTACAAAAGCTGAAACTCCTCAATGTTTCTGGAAACAAGCTGGTTGCCCTTCCTGATTCCATCTGCCAGTGCAGGTCATTGGTGGAGCTAGATGCAAGCTTTAACAGTCTCGCATATTTGCCAACAAACATAGGATACGAATTACAGAGTTTAGTGAAGCTGTCGATTCAACTGAACAAGATCCGATCGCTTCCCTCGTCAATCTGTGAGATGAAGTCCTTGCGCTCTCTGGATGCTCACTTCAATGAGCTGCATGGCCTTCCGGCGGCAATTGGGAAATTGACCAATCTTGAATCTCTCAATCTGAGCAGCAACTTCACTGACCTCAACGAACTTCCAGACTCTTTTGGTGACCTGATTAGCCTCAGGGAATTGGACCTCAGCAACAATCAGATTCATGCACTTCCCGACACATTCGGCCGCCTCGATAACTTGACCAAGCTTAAAATGGATCAGAACCCTCTTGAAGAGCCACCAATGCATATAGTAGATCAAGGGGTCCAAGCCGTAAAGGATTTCATGGTCCAGAGGTGGATTGAGAAGTTGGCAGAGGCAGAAAGGAAGAGCAAGCAGGATTTCCAAGAACAAGGAGAGAATGGATGGTTGACAAGAAGCACTTCCTGGTTGAAGAATGTTTCTGAAAATGTAACTGAGTATATTGGAACTACAGTTCTGTCCCCAAAGACCCCCAAAGGTTCTTCTTATCTTGATCAGCAGCTATAA | 1599 | 0.5122 | MDPHPGTFPVLSYVMSRLPSFGRATSSPTAATTTTTTTHSQFDIEQPESSSSSSSSSRHHNHSEIIGQMPQLTDPALLESMTRAITDVSQARSVLKLIGDRPTHEEIDNAKAKLADIDAHLSRQLEEIVALQKPPESSPDTWRGHVAKREKECRDSAESEKRVFKSLIQLDEMHDAYAKLLRDAESRLVKIYEQRVEEDDEGGGGGRDEVNEHVKEILEEANVKGGVERVDLSGQHLRYLPEAFGRIQNLVVLLLSGNQLSVIPDSVAGLQNLEELNVSSNVLESLPDSIGLLQKLKLLNVSGNKLVALPDSICQCRSLVELDASFNSLAYLPTNIGYELQSLVKLSIQLNKIRSLPSSICEMKSLRSLDAHFNELHGLPAAIGKLTNLESLNLSSNFTDLNELPDSFGDLISLRELDLSNNQIHALPDTFGRLDNLTKLKMDQNPLEEPPMHIVDQGVQAVKDFMVQRWIEKLAEAERKSKQDFQEQGENGWLTRSTSWLKNVSENVTEYIGTTVLSPKTPKGSSYLDQQL* | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev01g1970 | 532 | ProSiteProfiles | Leucine-rich repeat profile. | 413 | 434 | IPR001611 | GO:0005515 | |
| Aev01g1970 | 532 | Pfam | Leucine rich repeat | 387 | 447 | IPR001611 | GO:0005515 | |
| Aev01g1970 | 532 | Pfam | Leucine rich repeat | 272 | 329 | IPR001611 | GO:0005515 | |
| Aev01g1970 | 532 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING | 34 | 516 | - | - | |
| Aev01g1970 | 532 | Gene3D | Ribonuclease Inhibitor | 192 | 330 | IPR032675 | - | |
| Aev01g1970 | 532 | Gene3D | Ribonuclease Inhibitor | 331 | 467 | IPR032675 | - | |
| Aev01g1970 | 532 | SMART | LRR_typ_2 | 270 | 292 | IPR003591 | - | |
| Aev01g1970 | 532 | SMART | LRR_typ_2 | 247 | 269 | IPR003591 | - | |
| Aev01g1970 | 532 | SMART | LRR_typ_2 | 340 | 363 | IPR003591 | - | |
| Aev01g1970 | 532 | SMART | LRR_typ_2 | 317 | 339 | IPR003591 | - | |
| Aev01g1970 | 532 | SMART | LRR_typ_2 | 386 | 410 | IPR003591 | - | |
| Aev01g1970 | 532 | SMART | LRR_typ_2 | 411 | 434 | IPR003591 | - | |
| Aev01g1970 | 532 | SMART | LRR_typ_2 | 293 | 316 | IPR003591 | - | |
| Aev01g1970 | 532 | MobiDBLite | consensus disorder prediction | 21 | 62 | - | - | |
| Aev01g1970 | 532 | SMART | LRR_bac_2 | 270 | 289 | - | - | |
| Aev01g1970 | 532 | SMART | LRR_bac_2 | 386 | 407 | - | - | |
| Aev01g1970 | 532 | SMART | LRR_bac_2 | 293 | 312 | - | - | |
| Aev01g1970 | 532 | SMART | LRR_bac_2 | 363 | 382 | - | - | |
| Aev01g1970 | 532 | SMART | LRR_bac_2 | 316 | 335 | - | - | |
| Aev01g1970 | 532 | SMART | LRR_bac_2 | 340 | 359 | - | - | |
| Aev01g1970 | 532 | SMART | LRR_bac_2 | 247 | 266 | - | - | |
| Aev01g1970 | 532 | SMART | LRR_bac_2 | 411 | 430 | - | - | |
| Aev01g1970 | 532 | SUPERFAMILY | L domain-like | 226 | 448 | - | - | |
| Aev01g1970 | 532 | PANTHER | PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 | 34 | 516 | - | - | |
| Aev01g1970 | 532 | Coils | Coil | 107 | 127 | - | - | |
| Aev01g1970 | 532 | ProSiteProfiles | Leucine-rich repeat profile. | 272 | 293 | IPR001611 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev01g1970 | Aev-Chr1 | 24466380 | 24469063 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aev01g1970 | 240 | 450 | Receptor kinase-like Gene Family | AT3G51740 | 32.569 | 9.13e-17 | 82.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev01g1970 | - | - | gmx:100782818 | 684.1 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aev01g1970 | 01 | 24466380 | 24469063 | Aev08g2304 | 08 | 22268592 | 22270387 | PCT |