Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1946 ATGACGATGAAGAAGAAGTTCTTGTGGGTCGCACTATTTTTATCACTTGTTTTAATTCTGGGAGTCGCGGAGAGCTTCGACTTCCACGAAAAAGAATTGGAATCGGAGGAATCGTTATGGGAGTTGTACGAGAGGTGGAGGAGCCACCACACGGTTTCTAGAAGCTTCGAAGAGAAGTTGAAGCGGTTCAACGTGTTCAAAGAAAACGTGATGCACGTGCACAATACGAACAAGATGGATAAGCCTTATAAGCTGAAGCTGAACAAGTTTGCAGACATGACCAACCATGAGTTCAGGAGTATCTATGCTGCCTCCAAGGTTGGACATCATAGGATGTTCCGTGGGGCGCCACGTGGCAATGGGACCTTCATGTATGAGAATGTTGAGAGGGTTCCTACTTCTGTGGATTGGAGGAAGAAAGGGGCTGTCACTGATGTTAAGGATCAAGGACACTGTGGTAGTTGCTGGGCATTTTCAACAATAGTAGCGGTCGAAGGTATAAACCAAATAAAGACAAAAAAGCTAGTATCATTGTCGGAGCAAGAACTTGTGGATTGTGACACAAACCAAAACCAAGGATGCAACGGCGGTCTTATGGATTACGCGTTCGAGTTCATAAAGCAAAAGGGTGGCATCACAGCAGAATCTGATTACCCTTACACCGCACAAGATGGAACCTGTGATGAATCAAAGGAGAAGGCAGTAGTGTCAATTGATGGGCATGAGAGCGTACCTGCCAACAATGAAGGCGCATTGCTCAAAGCTGCTGCCAACCAACCTATTTCTGTTGCCATTGAGGCCTCCGGATCTGACTTCCAATTCTACTCCGAGGGAGTATTTACCGGAGAGTGTGGCACAGAGCTAGACCATGGAGTTGCAATAGTGGGGTATGGAGCAACCCAAGATGGAACCAAATATTGGATTGTGAAGAACTCATGGGGTCCAGAATGGGGAGAACAAGGCTACATTAGGATGCAACGAGCCATTTCTCGCAAAACAGGCCTTTGTGGCATCGCAATGGAGGCTTCTTACCCAATCAAAAAGTCCTCTACCAACCCAACAAAACCTTCTTCATCATCTCTTAAGGACGAGCTTTAA 1098 0.4627 MTMKKKFLWVALFLSLVLILGVAESFDFHEKELESEESLWELYERWRSHHTVSRSFEEKLKRFNVFKENVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSIYAASKVGHHRMFRGAPRGNGTFMYENVERVPTSVDWRKKGAVTDVKDQGHCGSCWAFSTIVAVEGINQIKTKKLVSLSEQELVDCDTNQNQGCNGGLMDYAFEFIKQKGGITAESDYPYTAQDGTCDESKEKAVVSIDGHESVPANNEGALLKAAANQPISVAIEASGSDFQFYSEGVFTGECGTELDHGVAIVGYGATQDGTKYWIVKNSWGPEWGEQGYIRMQRAISRKTGLCGIAMEASYPIKKSSTNPTKPSSSSLKDEL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1946 365 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 306 325 IPR025661 -
Aev01g1946 365 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 22 353 - -
Aev01g1946 365 MobiDBLite consensus disorder prediction 346 365 - -
Aev01g1946 365 Pfam Papain family cysteine protease 131 346 IPR000668 GO:0006508|GO:0008234
Aev01g1946 365 CDD Peptidase_C1A 132 345 IPR039417 -
Aev01g1946 365 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 288 298 IPR025660 -
Aev01g1946 365 SMART pept_c1 131 346 IPR000668 GO:0006508|GO:0008234
Aev01g1946 365 Pfam Cathepsin propeptide inhibitor domain (I29) 43 98 IPR013201 -
Aev01g1946 365 PRINTS Papain cysteine protease (C1) family signature 290 300 IPR000668 GO:0006508|GO:0008234
Aev01g1946 365 PRINTS Papain cysteine protease (C1) family signature 149 164 IPR000668 GO:0006508|GO:0008234
Aev01g1946 365 PRINTS Papain cysteine protease (C1) family signature 306 312 IPR000668 GO:0006508|GO:0008234
Aev01g1946 365 SUPERFAMILY Cysteine proteinases 36 346 IPR038765 -
Aev01g1946 365 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 149 160 IPR000169 -
Aev01g1946 365 Gene3D Cysteine proteinases 18 348 - -
Aev01g1946 365 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 22 353 - -
Aev01g1946 365 SMART Inhibitor_I29_2 43 98 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1946 Aev-Chr1 24332281 24335260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1946 K16292 - gmx:547487 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1946 01 24332281 24335260 Aev01g1946 01 24332281 24335260 ECH
Aev01g1946 01 24332281 24335260 Aev08g2345 08 22561003 22562376 PCT