Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g1905 ATGGGGTGCGCAGAATTCGAGCGTCTTCTCGAGTACTTCGACGAAGATGGGGACGGTAAGATTTCAGCGACAGAGCTCCGGAACCGGCTAGCCATGATGGGTGCTGGTGGTGAGGTTTTACTATTGGAGGAAGCAGAGATGGCAATTGCGGCATTGGATTCGGACGGTGATGGGTTGCTAAGTTTGGAGGATTTGGTGAAGCTGATTGAAGGAGGAGCAGAGGAAGAGAAATTGAAGGATTTGAAGGAAGCTTTTGAGATGTATGATAAGGAAAAGTGTGGGTTCATAACACCTAAAGGGTTGAGGAGCATGTTGAAGAAGTTGGGGGAATCAAAGTCAATTGAGGAATGCAAAGTTATGATTAGTAGGTTTGATTTGAATGGGGATGGCATGCTTAGCTTTGAAGAGTTCAGGATTATGATGATGCCAAACTGA 435 0.4575 MGCAEFERLLEYFDEDGDGKISATELRNRLAMMGAGGEVLLLEEAEMAIAALDSDGDGLLSLEDLVKLIEGGAEEEKLKDLKEAFEMYDKEKCGFITPKGLRSMLKKLGESKSIEECKVMISRFDLNGDGMLSFEEFRIMMMPN* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g1905 144 ProSitePatterns EF-hand calcium-binding domain. 14 26 IPR018247 -
Aev01g1905 144 ProSitePatterns EF-hand calcium-binding domain. 53 65 IPR018247 -
Aev01g1905 144 SUPERFAMILY EF-hand 4 142 IPR011992 -
Aev01g1905 144 ProSiteProfiles EF-hand calcium-binding domain profile. 1 36 IPR002048 GO:0005509
Aev01g1905 144 CDD EFh 80 142 IPR002048 GO:0005509
Aev01g1905 144 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 4 141 - -
Aev01g1905 144 Gene3D - 71 144 - -
Aev01g1905 144 ProSiteProfiles EF-hand calcium-binding domain profile. 40 75 IPR002048 GO:0005509
Aev01g1905 144 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 4 141 - -
Aev01g1905 144 ProSitePatterns EF-hand calcium-binding domain. 125 137 IPR018247 -
Aev01g1905 144 SMART efh_1 5 33 IPR002048 GO:0005509
Aev01g1905 144 SMART efh_1 80 108 IPR002048 GO:0005509
Aev01g1905 144 SMART efh_1 116 144 IPR002048 GO:0005509
Aev01g1905 144 SMART efh_1 44 72 IPR002048 GO:0005509
Aev01g1905 144 ProSiteProfiles EF-hand calcium-binding domain profile. 76 111 IPR002048 GO:0005509
Aev01g1905 144 ProSiteProfiles EF-hand calcium-binding domain profile. 112 144 IPR002048 GO:0005509
Aev01g1905 144 Gene3D - 3 70 - -
Aev01g1905 144 Pfam EF-hand domain pair 79 141 IPR002048 GO:0005509
Aev01g1905 144 Pfam EF-hand domain pair 10 69 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g1905 Aev-Chr1 24048646 24049080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g1905 5 141 EF-hand Containing Proteins AT1G76650 48.175 2.90e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g1905 K13448 - gmx:100816563 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g1905 01 24048646 24049080 Aev01g1905 01 24048646 24049080 ECH