Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0918 ATGCCAATTAAATATGCTGATGGTGGTGATGGGCGTGAAATGGCTGCAAAACGTCAGCGGACTGTTGATCCAGGATCGTCGTTCTATGGTAGTTCCCCGGGTTCTAGTTTTATGTACAATCCATCTCCATATGGATATGTCAGCCAACCTCCTCCTCCCCCACCTTTTCCTGTTGTTCGACTGCGTGGCCTTCCCTTTGATTGTACGGAAACCGATGTGGCTGAGTTCTTCCATGGTCTAGACATAGTTGATGTTCTTTTTGTTCACAAAGGTGGAAAGTTCACTGGGGAAGCTTTCTGTGTTCTGGGGTATCCTCTTCAAGTTGATTTTGCTCTTCAAAGAAATAGACAGAACATTGGTAGACGATATGTTGAGGTTTTCAGAAGTAAGAGGCAGGAGTACTACAAGGCAATTGCAAATGAGATTTCAGATGCCCGAGGTGGTTCGCCACGCCGTAGTGCACCCCGGGCTAAATCGTATGACGATGTAAAAGATTCAGCTGAGCATACAGGGGTGTTGCGACTGAGGGGCTTGCCATTTTCTGCAAGTAAGGATGACATAATGGACTTCTTTAAGGATTTTACGCTGTCAGAGGATTCAGTTCATATCGTAATGAATTCAGAGGGCAGACCATCCGGTGAGGCTTATGTGGAATTCTCAAATGCCGGAGATTCAAAAGAAGCAATGGCGAAAGACAGGATGACACTCGGAAGTCGCTACATAGAGTTGTTTCCTTCATCACACTGTGAGATGGAAGATGCTGTTTCACGAGGACGGTGA 780 0.4603 MPIKYADGGDGREMAAKRQRTVDPGSSFYGSSPGSSFMYNPSPYGYVSQPPPPPPFPVVRLRGLPFDCTETDVAEFFHGLDIVDVLFVHKGGKFTGEAFCVLGYPLQVDFALQRNRQNIGRRYVEVFRSKRQEYYKAIANEISDARGGSPRRSAPRAKSYDDVKDSAEHTGVLRLRGLPFSASKDDIMDFFKDFTLSEDSVHIVMNSEGRPSGEAYVEFSNAGDSKEAMAKDRMTLGSRYIELFPSSHCEMEDAVSRGR* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0918 259 CDD RRM_hnRNPH_ESRPs_RBM12_like 172 244 - -
Aev01g0918 259 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 7 259 - -
Aev01g0918 259 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 174 241 IPR000504 GO:0003723
Aev01g0918 259 Gene3D - 47 147 IPR012677 -
Aev01g0918 259 Gene3D - 152 258 IPR012677 -
Aev01g0918 259 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 171 259 IPR000504 GO:0003723
Aev01g0918 259 SUPERFAMILY RNA-binding domain, RBD 163 255 IPR035979 GO:0003676
Aev01g0918 259 SUPERFAMILY RNA-binding domain, RBD 45 136 IPR035979 GO:0003676
Aev01g0918 259 SMART rrm1_1 58 127 IPR000504 GO:0003723
Aev01g0918 259 SMART rrm1_1 172 244 IPR000504 GO:0003723
Aev01g0918 259 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED 7 259 - -
Aev01g0918 259 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0918 Aev-Chr1 9050998 9051896 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0918 K12898 - gmx:100805177 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0183 07 1040798 1044992 Aev01g0918 01 9050998 9051896 PCT