Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0908 ATGGATGAAGGTGAGGGAGGCTACGGCGAGAGCGGGGATCCCATGGATCAGTTCCACCGTAACGAAGCTATATCCGCAGTCGCCGATGAGGGTTTCTTGGGCGAGGAAGAAGACGATGACTACGAGGACCTCTACAACGACGTCAATGTTGGCGAGGGATTCCTCCAATCACTGCGCAAAAACGACGATCCAGGGTTCCGAAATGATGTCGCTGTTCTGGACAACAAGAAGCCACAACAAGATGCTCCTGCGGTCTCGATACCCGGTGTCGACGGTGAGGGTACTGGTGGTGGTGGTGGGGTTGTGGATGGGGGTTCTAGGGCTTCAGGGTTTAGAGGGAACGATTTTGGCACGAAAGGGGGCGCTGGATCTGGAATTAGGGTTGAATTGGGGCAGCCTTCTGGCAAGATGAGTGGGTTTGAGGAGCAGAGTGTTAATGATGGCGTTGCGGTGCAGGGGATTGTGCAGCAGCAGCAGCAGCAGCAGCCTCATGGTGGGGTTGTTGGCTCTGTTGGGAATGAGGGTTTGGTCAGGCAAGGTGGTCCTGTTGGTGGAGTTGGGGTTGTAGTTGGAGGAGATATTAATAGGGTTGGTGGAAATGGTGTTGGGAACAGTCTGAGTGCTGCTACTGGTGTTAACATCGTGGGAGCTGGTGCCGGAGCTACGGTTGGTGCAGCTGGTGGGGGTACCATATTGTTTGTGGGTGATTTGCATTGGTGGACTACTGATGCTGAGCTTGAAGCTGAGCTTTGCAAGTATGGGCCTGTGAAGGAGGTGAAGTTTTTTGATGAGAAGGCGAGTGGGAAATCCAAAGGGTATTGCCAGGTTGAGTTTTTAGATCCTTCTGCTGCCACTGCCTGTAAGGAAGGGATGAATGGGCATATGTTTAATGGCAGGCCGTGTGTTGTTGCGTATGCGTCGCCTTTTACTGTTAAGAAAATGGGAGAGGCTCAGGTGAATAGGAATCAGCAGATGACTCAATCTGCAGTTCCACAGGGAAGGAGGGGGCCTGCTGATGCAGGAGCTAAGCCTGGTGGGAGTAATATTGCGACTGGCGGTAACTACCAAGGTGTAGACGGGAATAGAGGATATGGGAGGGGTAATTGGGGCAGAGGGAATAATCCAGGGATGGGTAATAGAGGCCCTGTTAATGCTATGAGGAATAGGGGTGGTGGGATGGGTGGTCGAGGTTTAATGGGAAATGGTGGGAATGGATTTGGACAGGGTATGGGTGCTACTCCACCTATGATGCATCCTCAGTCAATGATGAATCAGGGTTTTGATCCTGCATTTGGCGGTCCCATGGGTAGAATGGGTAGCTATGGAGGCTTTCCTGGTGCTCCAACTCCTCCATTCTCCGGCATGTTGCCTTCATTCCCTGGTGTTGGAGGCGTTGGTTTGCCTGGAGTAGCACCTCATGTTAATCCAGCCTTTTTTGGGAGAGGGATGCCTGTGAATAGTATGGGGATGATGCCCAGTTCTGGCATGGATGGACCTAATATGGGAATGTGGTCGGATCCGAATATGGGTGGATGGGGTGGTGAAGAGCATGGTGGTGGCAGGGCTGGAGAATCAAGTTACGGGGAGGAAGCTGCATCTGACCATCAGTATGGTGAGGCGAGTCATGAAAGAAGTGGTTGGCCTAATGCTATGAGGGAAAAAGATAGAGGATCAGAAAGGGACTGGTCTGGTTCCTCTGAGAGAAGGTACAAGGATGATAGAGATCAAGGATATGAGAGAGATGCACCTAGAGAAAAAGATACGGGCCATGACCATGAATGGTCTGAAAGAAGGCATCGTGATGATAGAGAGATGGGTCGAGAAAAATCACGTGACCGTGATCGGGAACGCTCTCGAGACCGTGAAAGAGATCGTGAGCGTGACAGGTACAGGGAAGACAGGGACAGATATGCAGATCATCATAGGCACAGAGACCGTGAAGCAGACCATGATGATGAGCGGGAACGGGGACGATCATCCAGGCATAACAAATCACGATTATCACAAGAGGACGAACACCATTCTAGACCAAGAGATGCTGATTATGGGAAGAGGAGGCGGCTTACGTCTGAGTAA 2076 0.5154 MDEGEGGYGESGDPMDQFHRNEAISAVADEGFLGEEEDDDYEDLYNDVNVGEGFLQSLRKNDDPGFRNDVAVLDNKKPQQDAPAVSIPGVDGEGTGGGGGVVDGGSRASGFRGNDFGTKGGAGSGIRVELGQPSGKMSGFEEQSVNDGVAVQGIVQQQQQQQPHGGVVGSVGNEGLVRQGGPVGGVGVVVGGDINRVGGNGVGNSLSAATGVNIVGAGAGATVGAAGGGTILFVGDLHWWTTDAELEAELCKYGPVKEVKFFDEKASGKSKGYCQVEFLDPSAATACKEGMNGHMFNGRPCVVAYASPFTVKKMGEAQVNRNQQMTQSAVPQGRRGPADAGAKPGGSNIATGGNYQGVDGNRGYGRGNWGRGNNPGMGNRGPVNAMRNRGGGMGGRGLMGNGGNGFGQGMGATPPMMHPQSMMNQGFDPAFGGPMGRMGSYGGFPGAPTPPFSGMLPSFPGVGGVGLPGVAPHVNPAFFGRGMPVNSMGMMPSSGMDGPNMGMWSDPNMGGWGGEEHGGGRAGESSYGEEAASDHQYGEASHERSGWPNAMREKDRGSERDWSGSSERRYKDDRDQGYERDAPREKDTGHDHEWSERRHRDDREMGREKSRDRDRERSRDRERDRERDRYREDRDRYADHHRHRDREADHDDERERGRSSRHNKSRLSQEDEHHSRPRDADYGKRRRLTSE* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0908 691 MobiDBLite consensus disorder prediction 325 358 - -
Aev01g0908 691 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 232 301 IPR000504 GO:0003723
Aev01g0908 691 MobiDBLite consensus disorder prediction 74 141 - -
Aev01g0908 691 MobiDBLite consensus disorder prediction 1 24 - -
Aev01g0908 691 SUPERFAMILY RNA-binding domain, RBD 229 314 IPR035979 GO:0003676
Aev01g0908 691 MobiDBLite consensus disorder prediction 497 691 - -
Aev01g0908 691 CDD RRM_CFIm68_CFIm59 232 305 - -
Aev01g0908 691 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6-LIKE 1 690 - -
Aev01g0908 691 Gene3D - 221 316 IPR012677 -
Aev01g0908 691 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 1 690 IPR034772 -
Aev01g0908 691 MobiDBLite consensus disorder prediction 535 691 - -
Aev01g0908 691 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 230 308 IPR000504 GO:0003723
Aev01g0908 691 SMART rrm1_1 231 304 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0908 Aev-Chr1 8906524 8908599 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0908 K14398 - gmx:100782869 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0908 01 8906524 8908599 Aev01g0908 01 8906524 8908599 ECH