Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0423 ATGGCGCCACAGCCAGTTTCAGCTCTTGCAAAGTACAAGCTTGTGTTCTTGGGCGATCAATCCGTCGGCAAAACCAGCATCATCACTCGCTTCATGTACGACAAATTCGATAACACCTATCAGGCTACAATTGGTATTGATTTTCTATCAAAGACTATGTATCTTGAAGATCGAACTATTCGGCTGCAGCTTTGGGATACGGCTGGACAAGAACGGTTTAGAAGTCTTATTCCAAGCTACATTAGAGACTCTTCTGTTGCTGTCATCGTTTATGATGTTGCGAGCCGTCAGACTTTCCTAAACACAATAAAATGGATCGAAGAAGTGCGCAGTGAGAGAGGCAACGATGTAATTGTTACTCTTGTTGGCAACAAAACTGACCTTGTGGATAAGAGGCAAGTCTCTACAGAGGAAGGCGAAGCAAAGGCCCGCGAGTTAAATACTATGTTTATTGAAGCTAGTGCCAAAGCTGGCTTCAATATAAAGGCCCTCTTTCGAAAAATTGCTGCTGCATTACCTGGAATGGAAACACTATCTTCCTCAAAACAAGAAGATATGGTCGATGTGAACCTGCGGTCTTCCGGTAGCCATGATTCTCAAGCTCAAAACAACCTCAACCTCTCCGAACTTGATCCAACCAACCCAAACCCAATCCTCTCCGTATTGGACTCATGCACCGGTCTCCGACAGTTCAACCAAGTCCACGCCCAGCTCGTAGTTTCTGGAATCTTCCAGAACCTTCTCGTAGCCGGCAGAGCCATCAAAAAACTCTGCTCCGATCCCCTAACTGCCCCACGTGCCACTCACGTGTTCGATCACGTGCTTCGACCAGATGCCTTCCTCTGCAACACCATCATGCGGAGCCATGCTAGCAGGGGCGATTCCTCTGGTGTACTCCGTTTTTACTATCATAGAATGGTCGCACGATGGGTCGAGCCGAATCATTATACGTTCCCGATTCTTATCAAGGTTTGTGGCGATGTTGGGTGGGTGAGAGAAGGTGAAAAGGGTCATGCCCGTGTTGTGAAGTTCGGGTTTGGGTCTGATTTGTTTGTTAGGAACTCGTTGATAAGGATGTATTCGGTTTTCGGGACGATTGGAGATGCCTGTAGGGTGTTTGAGGAAAGTCCTGTGTTGGATTTGGTGAGTTATAACTCGATGATTGATGGGTATGTGAAAAACGGTGAAATTGGTGCTGCGCGCCGATTGTTTGATGAAATGCCGGAGAGGGATGTTTTTAGTTGGAATTGCATGATTGCGGGGTGTGTTGGAGTTGGTGATTTAGAGGCTGCAAATGATTTCTTTGGGAGGATGCCGGCTAGAGATGTGGTTTCCTGGAATTGCATGGTTGATGGGTATGCGAGGATTGGGGATGTTAGTATGGCTCTTGAGTTGTTTGATCGGATGCCTACAAGGAATGTGGTTTCTTGGAATTCTGTATTGGCGTTGTATGTGCGGATTAAGGATTTCGGTGAGTGTTTGAGAATGTTTGATAGGATGGTGGAGAGTGGAAAAGTTGTGCCGAATGAGGCTACCCTAGTAAGTGTGCTGACGGCATGTGCTAATTTAGGGAGGCTCGAGATGGGCGTGTGGGTTCACTCTTTTATACGAAGTCGGAACATTAAACCTGATGTCTTGCTTTCCACCTGTCTTCTGACAATGTATGCAAAATGTGGGTCTATGGATCTAGCTAGAGATGTTTTTGATGAGATGCCTGTTAAAAGTGTTGTATCTTGGAACTCTATGATCATGGGATATGGCTTGCATGGCAGTGGAGACAAAGCTTTGGAACTATTCTTGGAGATGGAGAAGGTAGGTCCGCCGCCAAATGATGCTACTTTTATCAGTGTCTTATCTGCATGTACACATGCGGGTATGGTCATGGAGGGTTGGTGGTACTTTGACATCATGCGTCGAGTCTACAAAATTGAACCCAAGGTTGAACACTATGGTTGCATGGTCGACCTCCTTGCTCGAGCTGGTTTGGTGAAAAATTCAGAAGATCTTATAAGAAAGGTTCCTATGAAGGCTGGATCTGCATTATGGGGAGCTCTGCTTTCAGGTTGTAGGACCCACATAAACGCGGAACTTGGAAAGATTGTAGCTAAGAGACTTATCGAGTTAGAGCCACAGGATATTGGCCCTTATATAATGCTGTCAAATATATACGCTGCTGAAGGGAGATGGGATGATGTTGAACGTGTGAGATTGATGATAAAAGAAAAAGGATTACAGAAAGAAGCAGTGTCAAGCTTGGTTCATCTTGAAGATTTTGAATCTAAACATTTTGTTATGAATAATTCAGCCTATAGGAAAAGCATTATGCACTCAATGTTGGGTGAATTAGGTGCACAGATGAAACTATCTGTTGCTAACTCAATCCAGAAAAGTAATTTGAGACCGGGATAG 2409 0.4496 MAPQPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTIKWIEEVRSERGNDVIVTLVGNKTDLVDKRQVSTEEGEAKARELNTMFIEASAKAGFNIKALFRKIAAALPGMETLSSSKQEDMVDVNLRSSGSHDSQAQNNLNLSELDPTNPNPILSVLDSCTGLRQFNQVHAQLVVSGIFQNLLVAGRAIKKLCSDPLTAPRATHVFDHVLRPDAFLCNTIMRSHASRGDSSGVLRFYYHRMVARWVEPNHYTFPILIKVCGDVGWVREGEKGHARVVKFGFGSDLFVRNSLIRMYSVFGTIGDACRVFEESPVLDLVSYNSMIDGYVKNGEIGAARRLFDEMPERDVFSWNCMIAGCVGVGDLEAANDFFGRMPARDVVSWNCMVDGYARIGDVSMALELFDRMPTRNVVSWNSVLALYVRIKDFGECLRMFDRMVESGKVVPNEATLVSVLTACANLGRLEMGVWVHSFIRSRNIKPDVLLSTCLLTMYAKCGSMDLARDVFDEMPVKSVVSWNSMIMGYGLHGSGDKALELFLEMEKVGPPPNDATFISVLSACTHAGMVMEGWWYFDIMRRVYKIEPKVEHYGCMVDLLARAGLVKNSEDLIRKVPMKAGSALWGALLSGCRTHINAELGKIVAKRLIELEPQDIGPYIMLSNIYAAEGRWDDVERVRLMIKEKGLQKEAVSSLVHLEDFESKHFVMNNSAYRKSIMHSMLGELGAQMKLSVANSIQKSNLRPG* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0423 802 PRINTS Transforming protein P21 ras signature 53 75 - -
Aev01g0423 802 PRINTS Transforming protein P21 ras signature 115 128 - -
Aev01g0423 802 PRINTS Transforming protein P21 ras signature 150 172 - -
Aev01g0423 802 PRINTS Transforming protein P21 ras signature 35 51 - -
Aev01g0423 802 PRINTS Transforming protein P21 ras signature 12 33 - -
Aev01g0423 802 Pfam E motif 692 747 IPR046848 -
Aev01g0423 802 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 442 476 IPR002885 -
Aev01g0423 802 ProSiteProfiles small GTPase Ras family profile. 7 286 IPR001806 GO:0003924|GO:0005525
Aev01g0423 802 Gene3D Tetratricopeptide repeat domain 228 338 IPR011990 GO:0005515
Aev01g0423 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 179 IPR027417 -
Aev01g0423 802 ProSiteProfiles small GTPase Rho family profile. 5 178 - -
Aev01g0423 802 SMART rho_sub_3 14 174 IPR001806 GO:0003924|GO:0005525
Aev01g0423 802 CDD Rab6 12 172 - -
Aev01g0423 802 SMART ras_sub_4 9 175 - -
Aev01g0423 802 TIGRFAM PPR: pentatricopeptide repeat domain 444 475 IPR002885 -
Aev01g0423 802 TIGRFAM PPR: pentatricopeptide repeat domain 281 314 IPR002885 -
Aev01g0423 802 TIGRFAM PPR: pentatricopeptide repeat domain 577 610 IPR002885 -
Aev01g0423 802 TIGRFAM PPR: pentatricopeptide repeat domain 413 443 IPR002885 -
Aev01g0423 802 TIGRFAM PPR: pentatricopeptide repeat domain 382 412 IPR002885 -
Aev01g0423 802 TIGRFAM PPR: pentatricopeptide repeat domain 549 575 IPR002885 -
Aev01g0423 802 TIGRFAM PPR: pentatricopeptide repeat domain 475 509 IPR002885 -
Aev01g0423 802 Pfam PPR repeat family 574 621 IPR002885 -
Aev01g0423 802 SMART rab_sub_5 12 175 - -
Aev01g0423 802 Pfam PPR repeat 444 473 IPR002885 -
Aev01g0423 802 Pfam PPR repeat 413 441 IPR002885 -
Aev01g0423 802 Pfam PPR repeat 382 411 IPR002885 -
Aev01g0423 802 Pfam PPR repeat 475 504 IPR002885 -
Aev01g0423 802 TIGRFAM small_GTP: small GTP-binding protein domain 11 168 IPR005225 GO:0005525
Aev01g0423 802 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 380 414 IPR002885 -
Aev01g0423 802 Gene3D Tetratricopeptide repeat domain 529 642 IPR011990 GO:0005515
Aev01g0423 802 Gene3D Tetratricopeptide repeat domain 441 528 IPR011990 GO:0005515
Aev01g0423 802 Gene3D Tetratricopeptide repeat domain 349 440 IPR011990 GO:0005515
Aev01g0423 802 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 575 609 IPR002885 -
Aev01g0423 802 PANTHER OS01G0913400 PROTEIN-RELATED 219 474 - -
Aev01g0423 802 PANTHER OS01G0913400 PROTEIN-RELATED 470 793 - -
Aev01g0423 802 PANTHER - 219 474 - -
Aev01g0423 802 PANTHER - 470 793 - -
Aev01g0423 802 Gene3D - 8 210 IPR027417 -
Aev01g0423 802 SMART ran_sub_2 17 215 - -
Aev01g0423 802 ProSiteProfiles small GTPase Rab1 family profile. 3 225 - -
Aev01g0423 802 Pfam Ras family 13 171 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0423 Aev-Chr1 3630289 3636685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0423 299 787 Glycoside Hydrolase AT3G49170 31.275 2.44e-80 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0423 - - lang:109349594 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0423 01 3630289 3636685 Aev01g0423 01 3630289 3636685 ECH