Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0415 ATGGCCTTAACACTTCGTTCTTCAATCTCTTTTATAAATCACAAAGAGACCAAAGTCTTAAAAAACTTTGAGGATGTCTTGGTTGCGGTTACCTTCGCGAAAATCAATCGATCTTTCCGCATACGTGCGAAGAATTCCATGCAGGAAGCACACCACACACTCGGCAGCCAGATGGACGATAAATGGGAGAAGGTGCACGCAGTGCCATCGGTCGCTCATGAGCACAACAATTCAAAGAGGGTGCCGGTGTTCGTGATGTTGCCACTAGACACGGTGACAATGGGGGGAAGCTTGAACAAGCCGAGGGCGATGAATGCGAGTTTGATGGCCTTGAAGAGTGCCGGGGTTGAAGGGGTAATGGTGGATGTATGGTGGGGCTTGGTTGAGAAAGATGGACCTTTGAAGTACAATTGGGATGCTTATGCTGAGCTTGTGCAGATGGTGCAAATGCATGGCTTGAAGCTTCAAGCTGTCATGTCTTTTCATCAGTGTGGAGGAAATGTTGGAGACACTTGCAGCATTCCTCTACCTCCATGGGTACTGGAAGAAATCAGCAAGAACCCTGACCTGGTTTACACAGACAGATCAGGGAGGAGAAATCCTGAATACGTCTCCTTAGGCTGTGATTCAGTGCCTGTTCTGAAAGGAAGAACTCCCATCCAAGTTTACTCTGACTACATGAGGAGCTTCCGTGACAGATTCAGAGATTTCTTGGGCAGTGTTATTGTGGAAATACAAGTGGGGATGGGTCCTTGTGGGGAGCTGAGATATCCATCTTATCCAGAAAGCAATGGAACTTGGAGGTTTCCTGGAATTGGAGAATTCCAATGCTATGACAAGTATATGAAAGCATCCTTAGCTGCAGCAGCTGAGGCCGTCGGAAAGAAAGAATGGGGGACAAATGGTCCCCATGACTCTGGCCAGTACAATCAATTTCCAGAGGATACTGGATTTTTCAGAAGGGAAGGAACATGGAACTCTGAATATGGACAGTTCTTTCTGGAGTGGTACTCCGGCAAATTGCTGGAACATGGTGACAGGATCCTTGCATCTGCCAAAGAAATATTCCAAACATCTGGAGCGAAACTATCCGGGAAAATTGCTGGAATTCACTGGCATTACGGAGCAAGGTCACATGCAGCTGAACTAACTGCCGGCTACTACAATACACGATTCAATGACGGATATCTACCAATAGCCAAAATGCTGGCAAAACATGATGTCGTCTTCAATTTCACCTGCATGGAAATGAAAGACAGAGAGCAGCCTAGCCATGCTAACTGCTCACCAGAAGGGTTGGTTCACCAAGTGAAGATGGCAACCAGGACAGCCGGAGTAGAACTCGCGGGTGAAAATGCCTTGGAGAGGTACGATGCAGATGCATATGCTCAAGTTTTGTCAACAAGTAGGTCAGACTCCGGAAGCGGATTGACTGCATTTACATATCTAAGGATGAACAAGAAGTTGTTCGAAGGTGAAAACTGGCGGCACCTAGTGGAATTTGTAAAAAGCATGTCAGAAGGTGGTCGGAGACAAAGACTTCCAGATTCTGATTCCCATGGAAGTGACCTTTACGTTGGGCACATCAAGGAAACTCAGAAGAAGAATCAAGCACAAGAGGTCGCTCTTGTGTGA 1635 0.4673 MALTLRSSISFINHKETKVLKNFEDVLVAVTFAKINRSFRIRAKNSMQEAHHTLGSQMDDKWEKVHAVPSVAHEHNNSKRVPVFVMLPLDTVTMGGSLNKPRAMNASLMALKSAGVEGVMVDVWWGLVEKDGPLKYNWDAYAELVQMVQMHGLKLQAVMSFHQCGGNVGDTCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYVSLGCDSVPVLKGRTPIQVYSDYMRSFRDRFRDFLGSVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMKASLAAAAEAVGKKEWGTNGPHDSGQYNQFPEDTGFFRREGTWNSEYGQFFLEWYSGKLLEHGDRILASAKEIFQTSGAKLSGKIAGIHWHYGARSHAAELTAGYYNTRFNDGYLPIAKMLAKHDVVFNFTCMEMKDREQPSHANCSPEGLVHQVKMATRTAGVELAGENALERYDADAYAQVLSTSRSDSGSGLTAFTYLRMNKKLFEGENWRHLVEFVKSMSEGGRRQRLPDSDSHGSDLYVGHIKETQKKNQAQEVALV* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0415 544 PANTHER - 1 544 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Plant beta-amylase signature 240 249 IPR001371 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Plant beta-amylase signature 481 495 IPR001371 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Plant beta-amylase signature 399 409 IPR001371 GO:0000272|GO:0016161
Aev01g0415 544 Gene3D Glycosidases 71 542 - -
Aev01g0415 544 SUPERFAMILY (Trans)glycosidases 79 508 IPR017853 -
Aev01g0415 544 PANTHER BETA-AMYLASE 1 544 - -
Aev01g0415 544 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 158 179 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 396 419 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 325 344 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 136 154 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 115 129 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 361 377 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 433 455 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 378 389 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 250 272 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 Pfam Glycosyl hydrolase family 14 84 501 IPR001554 GO:0000272|GO:0016161
Aev01g0415 544 ProSitePatterns Beta-amylase active site 1. 162 170 IPR018238 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0415 Aev-Chr1 3488170 3491051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev01g0415 1 544 Glycoside Hydrolase AT4G17090 72.777 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0415 K01177 - gmx:100818063 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0415 01 3488170 3491051 Aev01g0415 01 3488170 3491051 ECH