Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0413 ATGGATCAGTTGTCAGCTATCAGTGAGGACCTTGCTGAGATCGATGGTCGCCTCGCCGATAATTTCCGCGCACTATCGAATGGGTTTCAGAAGTTGGAGAAGATCAAGGATTCGAGCAGAAAGAGTAGGCAATTGGAAGAACTCACTGACAAAATGCGTGACTCTAAACGGCTTATAAAAGAGTTCGACAAAGAAATCAAAGCTTTGGAGGGTAACTTTGATAGAGAAACTAACAAAATGTTGAATGAGAAAAAGCAGTCAATGATCAAAGAGTTAAATTCATATGTTGCTTTGAAAAAACAATATGCTACAGATATTGAGAATAAGCGAATTGAGCTCTTTGAGGGGCCCAATGAAGGTTTTGCAGAAGAAAATGTCTTGCTAGCTTCCTCAATGACAAATCAACAGCTAATTGATGATGGGAATCGGATGATGGATGAGACAGATCAAGCCCTTGAAAGGGGAAAGAGGGTTGTTCAAGAGACGATAAATGTTGGTACAGAAGCTTCAGCAGCTCTTAAGGCTCAGACGGAACAAATGAGCAGAATTGTCAATGAGCTGGATTCTATCCATTTTTCCATAAAGAAAGCTTCTCAATTGGTGAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGGATTACTTTTCCTTATTGTTGCCGGAGTAATTGCTATCATTATTGTAAAGCTTGTACACCCAAACAACAAGGACATCCGCGACATTCCAGGGTTAGCTCCTCCAGCGATGAACCGAAAACTGCTTTGGAATCGCAGTTAA 786 0.4109 MDQLSAISEDLAEIDGRLADNFRALSNGFQKLEKIKDSSRKSRQLEELTDKMRDSKRLIKEFDKEIKALEGNFDRETNKMLNEKKQSMIKELNSYVALKKQYATDIENKRIELFEGPNEGFAEENVLLASSMTNQQLIDDGNRMMDETDQALERGKRVVQETINVGTEASAALKAQTEQMSRIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMGLLFLIVAGVIAIIIVKLVHPNNKDIRDIPGLAPPAMNRKLLWNRS* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0413 261 Coils Coil 45 86 - -
Aev01g0413 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Aev01g0413 261 PANTHER NOVEL PLANT SNARE 11 1 250 - -
Aev01g0413 261 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Aev01g0413 261 Pfam Sec20 150 222 IPR005606 GO:0005484|GO:0006890
Aev01g0413 261 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 250 - -
Aev01g0413 261 Gene3D - 133 212 - -
Aev01g0413 261 SUPERFAMILY SNARE fusion complex 132 205 - -
Aev01g0413 261 SMART tSNARE_6 137 204 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0413 Aev-Chr1 3469960 3473978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0413 K08494 - gmx:100786429 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0413 01 3469960 3473978 Aev01g0413 01 3469960 3473978 ECH