Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0396 ATGGATGTTGTTGCCACCGCTGCTACCACGAGCTTCTCGCTCCACAATCCCATCCTATCTTTCCCCTCTTCTTCCAGATTCCCAACCCCTATCCGAGCCCTCTCTTCCTCCTCCTCCTCGGCCGCCGTCAGAGCTTCCCTCTCCACTGACTTCGTCGCCCCTTTAGCCGCCGCTACTAGCAGTGTCTCAAGCCCCTTCGCCGGCCACAAGCTCCGACCTTCTTCCCTCAATCCGGCGTCGTTTCGTGGCTCCAAGGGTAAACGAGGCGTCGTTACTATGGTTATTCCTTTTTCAAGGGGAAGTGCATGGGAGCAACCTCCACCAGACTTGGCTTCTTACTTGTACAAAAATCGAATCGTTTATTTGGGCATGTCTCTTGTTCCATCTGTCACAGAGTTGATACTAGCTGAATTTCTTTACCTACAATATGAAGATGAAGACAAGCCTATTTACCTATACATAAACTCCACCGGGACAACTAAGGGAGGTGAGAAGTTGGGTTATGAGACCGAAGCATTTGCAATTTATGATGTGATGAGGTATGTTAAGCCTCCTATATTTACTCTCTGTGTTGGTAATGCTTGGGGAGAAGCAGCTTTGCTTTTGGCTGCTGGTGCAAAGGGAAACCGTTCTGCTTTGCCATCATCGACGATAATGATCAGACAGCCAATAGCTAGGTTTCAAGGTCAAGCAACTGATGTTAACCTTGCAAGAAAAGAAGTCAATAATGTGAAGACAGAATTGGTTAAATTGTACGCAAAGCATATTGAAAAATCACCTGAGCAGATCGAAGCTGATATACAGCGCCCAAAGTATTTTAGTCCAAGTGAAGCTGTTGAGTATGGAATCATAGATAAGGTAATATACAATGATAGGAGCTCTAAGGATCATGGAGTTGTTTCTGACCTTAAAAAGGCACAACTTATTTAA 930 0.4559 MDVVATAATTSFSLHNPILSFPSSSRFPTPIRALSSSSSSAAVRASLSTDFVAPLAAATSSVSSPFAGHKLRPSSLNPASFRGSKGKRGVVTMVIPFSRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDEDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQGQATDVNLARKEVNNVKTELVKLYAKHIEKSPEQIEADIQRPKYFSPSEAVEYGIIDKVIYNDRSSKDHGVVSDLKKAQLI* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0396 309 Coils Coil 234 254 - -
Aev01g0396 309 Pfam Clp protease 109 289 IPR023562 -
Aev01g0396 309 CDD S14_ClpP_2 109 287 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev01g0396 309 PRINTS Clp protease catalytic subunit P signature 188 205 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev01g0396 309 PRINTS Clp protease catalytic subunit P signature 149 169 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev01g0396 309 PRINTS Clp protease catalytic subunit P signature 109 124 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev01g0396 309 PRINTS Clp protease catalytic subunit P signature 266 285 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev01g0396 309 PRINTS Clp protease catalytic subunit P signature 209 228 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev01g0396 309 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 18 308 - -
Aev01g0396 309 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 18 308 IPR023562 -
Aev01g0396 309 Gene3D - 82 296 - -
Aev01g0396 309 SUPERFAMILY ClpP/crotonase 104 291 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0396 Aev-Chr1 3340866 3344768 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0396 K01358 - gmx:100780029 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0396 01 3340866 3344768 Aev01g0396 01 3340866 3344768 ECH