Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev01g0329 ATGGGAACTCGAACAAATTTCTACAAAAACCCATCCATCTCTTACAACAAACACTTCAGCCTCTCCTCTGTTCTTCAGAATCTCCATGCTTATAATGCCGCCACCGGGAATGTTCCTCCCGCCGACCAACCGCCTCCGGTCACCGCTGCCGACGACGGCGACAAAACTCGCTCCGTCAAACGCCGCCGTCAGCGCAAGTCGCCGAAAAGATCCCTGCACGATGATGATGATGATGATGGCCCTTCCTCCATGTCGCATCTCGATTACATCGAAAAGAGAAGGAAAGAAATTGATTCGTCTCGGAATTGCGAACGCGTTGAATTGACGGAAGATGTATTGAGAAACCCTAGTTCAGCTGTAGCCTTGGTGGATTATGCAAGTGATGATTCTGATGAATGTACACCTTCAGAATGTCAAGAAACACATACCATTCCAGATCCTGATCAAGCAAAAGAAGATGATGGAATCAAAAGCAGACATGAGCAGCGCTTTCCTGTTTCTGGAGAACCTATTTGTGTTATATGTGGCAGATATGGAGAGTACATATGCAATGAGACAGATGACGATGTCTGTAGCCTGGAGTGCAAAAATGATCTTCTGGAAATTCTTAAATCAAATGGGGGAACCTCCCACAACCTAGTCAGAGATTTCTCCTCCTTTGGGAATAGTGATGCCTTACAATCAGTTCCTGTGTTTAGCGATGATAGCTGGGATTATGATCGGCATCGCTGGACAAAAAAGAGATCTAGTCTTTCAACATACGAATGTTGGAAATGTCAACGACCTGGGCACCTTGCCGAAGATTGTTCTGTAAAGACTTCCAGTCAGATCACAGCAGCAAATAATAGATCTAGTTACATTCCCAAGGATCTCCTTGGACTGTATAGAAGATGCCACCAGATTGGTAAAAACTTATTGGCTACAAACTGTAATGTTTGCCGTGGCTCGTCAAATTTGGCAACATGCCTTGATTGTAGTATTGTCCTATGCGATGGGGCAGGTCACTTGGATGAGCATATAAGAACACACCCATCTCATCAAAAATATTACTCACACAAGCTTAAACGTCTGGTAAAATGCTGCAAGCCAACATGCAAGGTCACTGAGATCAAGGATCTCTTGGTTTGCCACTACTGCTTTGATAAAGCTTTTGAAAAGTTCTATGACATGTATACTGCTACATGGAAAGGAGCTGGGCTTTCAATTATATGGGGTTCTATATGCTGTGAAGATCACTTCACCTGGCACAGGATGAATTGCTTGAATGCAGATGTGGAAGAAAGTGCTTATATTGTGAAAAGAGAAAGCCATAAAGGCAAACGTAGGCAACTTAGTGACTTCATATTTTGA 1350 0.4363 MGTRTNFYKNPSISYNKHFSLSSVLQNLHAYNAATGNVPPADQPPPVTAADDGDKTRSVKRRRQRKSPKRSLHDDDDDDGPSSMSHLDYIEKRRKEIDSSRNCERVELTEDVLRNPSSAVALVDYASDDSDECTPSECQETHTIPDPDQAKEDDGIKSRHEQRFPVSGEPICVICGRYGEYICNETDDDVCSLECKNDLLEILKSNGGTSHNLVRDFSSFGNSDALQSVPVFSDDSWDYDRHRWTKKRSSLSTYECWKCQRPGHLAEDCSVKTSSQITAANNRSSYIPKDLLGLYRRCHQIGKNLLATNCNVCRGSSNLATCLDCSIVLCDGAGHLDEHIRTHPSHQKYYSHKLKRLVKCCKPTCKVTEIKDLLVCHYCFDKAFEKFYDMYTATWKGAGLSIIWGSICCEDHFTWHRMNCLNADVEESAYIVKRESHKGKRRQLSDFIF* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev01g0329 449 MobiDBLite consensus disorder prediction 128 161 - -
Aev01g0329 449 MobiDBLite consensus disorder prediction 69 88 - -
Aev01g0329 449 MobiDBLite consensus disorder prediction 35 88 - -
Aev01g0329 449 Gene3D - 152 208 - -
Aev01g0329 449 SMART c2hcfinal6 255 271 IPR001878 GO:0003676|GO:0008270
Aev01g0329 449 Pfam Zinc knuckle 256 270 IPR001878 GO:0003676|GO:0008270
Aev01g0329 449 MobiDBLite consensus disorder prediction 144 161 - -
Aev01g0329 449 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 1 449 - -
Aev01g0329 449 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 449 - -
Aev01g0329 449 Pfam HIT zinc finger 170 196 IPR007529 -
Aev01g0329 449 ProSiteProfiles Zinc finger CCHC-type profile. 256 269 IPR001878 GO:0003676|GO:0008270
Aev01g0329 449 SUPERFAMILY Retrovirus zinc finger-like domains 240 272 IPR036875 GO:0003676|GO:0008270
Aev01g0329 449 Gene3D - 245 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev01g0329 Aev-Chr1 2754662 2758639 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev01g0329 - - gmx:100814892 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g0329 01 2754662 2758639 Aev01g0329 01 2754662 2758639 ECH