Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1992 ATGGCCCTCAACACCTCTTTCTCCAAGTCCATTGTGGACAACATGATAGGAACTCATGTTCCTAAATCTGCTCTTCATGTTCCCAAATTTTCCTTGTCCCAGAATGACAACAAGGGTTGCAACTTGGGGTTCCCCAAACTTGTTCAAAACAAGGGAATTTTCCCTCTTCATGCTGTGCAATCCAAAACAATGGTGGACATGGACAATTTAGTGCTTCAAGGTCAAGAACAACCAATGGAATCCAAGACTATTAATGTCAAAATTCAGTTACAACGCAATTGCAATTTTGGGGAACAATTTCATGTAGTTGGCAATCATCCTATGTTTGGTTCATGGAACCCTGCAAATGCCATACCAATGACCTGGTCAGAAGGGCATGTGTGGACTGCAGAGATGGGTGTACCTATTGGAAAATACCATTTCAAAATCATTCTGAAGAGAAGAGAAAGTGAGATTGTTTGGCAGCCAGGGCCAGATAGAAATCTCCACACATGGGAAGCAATGAACAGAATCACTGTTCGTGAGGATTGGAACAATGCTGAACAACAGAAAGTAACAGAGGATGATGAAGTTCCTAACTCAAAGATGGAAGATCAATTTGCTCACCCAAATAATGAATCCCAGATTAAGTCAGAAATGCCAAATTTTGCTAAAATGCCCAAAGTGATGAAGAGCACAAGTTGA 684 0.4108 MALNTSFSKSIVDNMIGTHVPKSALHVPKFSLSQNDNKGCNLGFPKLVQNKGIFPLHAVQSKTMVDMDNLVLQGQEQPMESKTINVKIQLQRNCNFGEQFHVVGNHPMFGSWNPANAIPMTWSEGHVWTAEMGVPIGKYHFKIILKRRESEIVWQPGPDRNLHTWEAMNRITVREDWNNAEQQKVTEDDEVPNSKMEDQFAHPNNESQIKSEMPNFAKMPKVMKSTS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1992 227 Pfam Starch binding domain 84 169 IPR002044 GO:2001070
Aed9g1992 227 MobiDBLite consensus disorder prediction 178 227 - -
Aed9g1992 227 CDD CBM20 86 177 - -
Aed9g1992 227 Gene3D Immunoglobulins 79 178 IPR013783 -
Aed9g1992 227 MobiDBLite consensus disorder prediction 180 196 - -
Aed9g1992 227 MobiDBLite consensus disorder prediction 198 212 - -
Aed9g1992 227 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 78 179 IPR002044 GO:2001070
Aed9g1992 227 PANTHER ALPHA-AMYLASE 54 199 - -
Aed9g1992 227 PANTHER OS01G0856900 PROTEIN 54 199 - -
Aed9g1992 227 SUPERFAMILY Starch-binding domain-like 81 173 IPR013784 GO:0030246
Aed9g1992 227 SMART CBM_20_2 83 172 IPR002044 GO:2001070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1992 Aed-Chr9 23205154 23206758 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1992 - - gmx:100814042 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1992 9 23205154 23206758 Aed9g1992 9 23205154 23206758 ECH
Aed9g1992 9 23205154 23206758 Aed2g1164 2 9722536 9726906 PCT