Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1371 ATGGCAGCTGAATCTGATGTTCCCGTTATTCCTCTTCTCACTCCCTACAAAATGGGTGACTTCAATCTGTCCCATAGAGTTGTTTTGGCCCCGTTGACCAGAATGAGATCTTACAATAACGTTCCTCAGCCTCATGCTATATTGTATTACTCTCAGAGAACTTCTCCAGGGGGTCTTTTAATATGTGAAGCTACTGGGGTCTCTGATACTGCCCAAGGGTATTTTATTTTTGTACTTACCCTTTGTCATGGTGCATATTTGCCTCACAATTATGCAGATGTGGTCGTGACGTTCAATTGTGCAGAGTTTTTGTTGGGTCAATGGGTTGAAGCATGGAAACCCATTGTGAATGCTGTTCATGCCAAAGGTGGTGTGTTCTTTTGTCAGATTTGGCATGTTGGAAGGGTCTCAAGTCCAGATTTTCAGCCAAATGGGCAAGCACCAATATCTTCTACCGACAAGCCACTCAAACAAAATGGCATTGAGGAAGCACAATTAACACCACCAAGGAGGCTAAGGACAGATGAAATTCCTCATATTGTCAATGACTTTAGACTTGCTGCAAGAAATGCTGTGGAAGCTGGTTTTGATGGGGTTGAGATCCATGGTGCTCATGGCTACCTACTCGAGCAATTCATGAAAGACAAAGTGAATGATCGAACTGATGAGTATGGTGGATCCCTTGAGAACCGATGCCGATTCGCTCTGGAAGTGGTTGAGGCTGTTGTGAAAGAGATAGGAGCAGAAAGAGTTGGAATTAGACTATCCCCTTTTACAGAGCATTCAGAGTGTGGAGATTCAGACCCCAAAGCATTGGGGCTATACATGGCCAATGCCCTCAATAAATATAACATTCTCTATTGCCACATGGTGGAGCCAAGAATGAAGAATGCTCTTGAAGTAGTTGAGTGCCCTCACAACCTTATGCCAATGAGAAAGGCCTTCAATGGCACTTTTATTTCTGCAGGAGGTTATGACAGAAAAGATGGCATCAATGCTGTGGCTGATAATAGGACAGATCTTGTTGCATATGGTCGTTTGTTCTTGGCGAATCCAGATTTGCCAAAGAGATTTGGGTTAGATGCTTCTCTCAACAAGTACAATCGTAATCTATGCCTTTACTATGCTTTCCCAAGCCTGCACCAGCTGTCACAGATACTCCTAAGAAGAGTCCGCACGCGCGCTCCCAAGCCACATGCTTCAGTAAGAATTGATTTGAGATATAGTTCCTTGGTTAGTGGTCCAATTAGGAAATAG 1257 0.4375 MAAESDVPVIPLLTPYKMGDFNLSHRVVLAPLTRMRSYNNVPQPHAILYYSQRTSPGGLLICEATGVSDTAQGYFIFVLTLCHGAYLPHNYADVVVTFNCAEFLLGQWVEAWKPIVNAVHAKGGVFFCQIWHVGRVSSPDFQPNGQAPISSTDKPLKQNGIEEAQLTPPRRLRTDEIPHIVNDFRLAARNAVEAGFDGVEIHGAHGYLLEQFMKDKVNDRTDEYGGSLENRCRFALEVVEAVVKEIGAERVGIRLSPFTEHSECGDSDPKALGLYMANALNKYNILYCHMVEPRMKNALEVVECPHNLMPMRKAFNGTFISAGGYDRKDGINAVADNRTDLVAYGRLFLANPDLPKRFGLDASLNKYNRNLCLYYAFPSLHQLSQILLRRVRTRAPKPHASVRIDLRYSSLVSGPIRK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1371 418 PANTHER NADH OXIDOREDUCTASE-RELATED 109 371 IPR045247 GO:0010181|GO:0016491
Aed9g1371 418 Gene3D Aldolase class I 2 382 IPR013785 -
Aed9g1371 418 PANTHER 12-OXOPHYTODIENOATE REDUCTASE 1-RELATED 109 371 - -
Aed9g1371 418 Pfam NADH:flavin oxidoreductase / NADH oxidase family 109 358 IPR001155 GO:0010181|GO:0016491
Aed9g1371 418 Pfam NADH:flavin oxidoreductase / NADH oxidase family 12 74 IPR001155 GO:0010181|GO:0016491
Aed9g1371 418 CDD OYE_like_FMN 11 369 - -
Aed9g1371 418 PANTHER 12-OXOPHYTODIENOATE REDUCTASE 1-RELATED 9 74 - -
Aed9g1371 418 MobiDBLite consensus disorder prediction 143 165 - -
Aed9g1371 418 PANTHER NADH OXIDOREDUCTASE-RELATED 9 74 IPR045247 GO:0010181|GO:0016491
Aed9g1371 418 MobiDBLite consensus disorder prediction 143 158 - -
Aed9g1371 418 SUPERFAMILY FMN-linked oxidoreductases 11 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1371 Aed-Chr9 13348579 13352296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1371 10 384 Acyl Lipid Metabolism Gene Families AT1G76690 67.617 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1371 K05894 - gmx:100818208 629.787