Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1235 ATGTTGAAGGCCAAGAAGATATCTCGTTGGAAAAGTGATCCTGTGAGGGTTGCAGCTTTCTGCCTCAGCAACCTCAAGAGGGCTCAGGTCCTTGACACTGACATTTCTAAAGCTGTTGGTGAGTATTCTTCTCTTCCTCTTTTTTCATTCCTTACGTGGGTTTTGGAAGAAATGGTGGATAAAGTTTTTAAGAATGGTGATGGGGAGGAGTGTGTTTTTATGATTTTGTGTTTTTCTGTGTTTGCGAGTGGTTTGGGAAATTGGTTGGAAAAGGGGCAGTTTTGGTTGGGGATGGTGTTAACCAACCCTCTTGGCCAAAAGAATTATAGCTGTTACGACAAGATTTTGAAAGAAGAAATGGATGTTGAGTCCTATAGAGTGCTGGGCTATCTTCTTCTTGGCATTATCAGAATATTCTCAAAAAAGGTTGAATATGCGCTTCAAGATTGCAATAAGGTGCTCATTAATGTTACCAAGTTCGTGGCCAGTGAACAAAACTGTGATCTTGTGGAAACCTTGCGGGTGTCAGTTACTATACCAGACAGACTAGAGTTAGATGCATTCGAGCTGGATGAACTTGAAGAAGCTGACAGATCCCATACTGCTCCACCTGATCAAATTACTCTTAAAGAGAAAGAGATTGCGTGTACAAATGAAGGATTTTCCATTGGGCTGTTTTCTGAGAAGATCAGTATCCTACTTCAGTTCTTTTTTCTTGAAAACCTATTTTGTGCAGATTCTACTACACCAGAGTCGATGCTTATTGCTACACCAGCTGTGACAGAGCACCCTCCCTTTTCAAGGAAAAGAAGAGATGCCATTGATAGAATGATTGTCCTGCATAGCAAGGTAATTAAAAAGAGCTTATCGGATACAAAAAAATTAGTTCGTCTCCCAAAAGAATCCCGTCGTACTTTACTTGCTGCACACTGTGTGAAGAGACAGAGAGAATCTCCCATTTACAGTCTTCCAAATAGATTCTATGAGCCTTTGCTTCCATGTTATTCCTCTGAGCTTCAACTCCTACTCTCTAAAGAGAAAATGAAAATACCAAATTCCCTTAAGATTGTGGAAACTTCAGAGAATTTAGATGTGTCAAAATCTCCAACTTCTGGTGCTCCGCTAAGCCCTTCTCAATCCTCAGATACCCTTGAAGTTGGTGAAACTCCAATGATGCTAGTTGTACCTGAATCTCCGGCTTCTGGCATTCCAAAGCATAACGCAACTGTTTCACAGACTCCTCCTTTGTGTCCACATGATACCATAGAGATAGAATCTCTAGAAAGGAATGAAGTGCCTAATCTGATCGATGAGAATGTCAATAGTTCAATTATTGTTTACAAGATTGGCTTATCATCATGGTCTTCTTTGATAATGTACAGGAAAGTTGCAAGTTGCTTGCACAAGAGTTTCCTACATGCAAGCAAACAAAGAGAGCAGGATAAAGTAAAATTTTCACAAGCTTTTGGAGGCCAAGCGCGGAAAGCGGCTGCAAGGCTCTTTTATGAAGTGCTGGTTTTGAAAACTTCAGGCTATGTGGATGTGGAGCAAAACGAAGCTTATGGTGATATTGCAATGTCCAAACTCCCAAAATTAGATCAAACTTTTTAA 1611 0.4041 MLKAKKISRWKSDPVRVAAFCLSNLKRAQVLDTDISKAVGEYSSLPLFSFLTWVLEEMVDKVFKNGDGEECVFMILCFSVFASGLGNWLEKGQFWLGMVLTNPLGQKNYSCYDKILKEEMDVESYRVLGYLLLGIIRIFSKKVEYALQDCNKVLINVTKFVASEQNCDLVETLRVSVTIPDRLELDAFELDELEEADRSHTAPPDQITLKEKEIACTNEGFSIGLFSEKISILLQFFFLENLFCADSTTPESMLIATPAVTEHPPFSRKRRDAIDRMIVLHSKVIKKSLSDTKKLVRLPKESRRTLLAAHCVKRQRESPIYSLPNRFYEPLLPCYSSELQLLLSKEKMKIPNSLKIVETSENLDVSKSPTSGAPLSPSQSSDTLEVGETPMMLVVPESPASGIPKHNATVSQTPPLCPHDTIEIESLERNEVPNLIDENVNSSIIVYKIGLSSWSSLIMYRKVASCLHKSFLHASKQREQDKVKFSQAFGGQARKAAARLFYEVLVLKTSGYVDVEQNEAYGDIAMSKLPKLDQTF 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1235 536 Gene3D Structural maintenance of chromosome 1. Chain E 460 536 IPR023093 -
Aed9g1235 536 SUPERFAMILY "Winged helix" DNA-binding domain 461 532 IPR036390 -
Aed9g1235 536 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 247 536 - -
Aed9g1235 536 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 110 212 - -
Aed9g1235 536 PANTHER SCC1 / RAD21 FAMILY MEMBER 247 536 IPR039781 GO:0007062|GO:0008278
Aed9g1235 536 PANTHER SCC1 / RAD21 FAMILY MEMBER 110 212 IPR039781 GO:0007062|GO:0008278
Aed9g1235 536 Pfam N terminus of Rad21 / Rec8 like protein 113 168 IPR006910 GO:0005515
Aed9g1235 536 Pfam Conserved region of Rad21 / Rec8 like protein 479 531 IPR006909 -
Aed9g1235 536 MobiDBLite consensus disorder prediction 362 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1235 Aed-Chr9 9718093 9727825 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1235 K06670 - gmx:100810733 384.415