Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1219 ATGGCTCTTCTAGCAGGCTTGATGAGTTTTGCTGCTTTGACCCTTTTCTTGGTCCTAGCAACATCTGTGTCTCATCAAGCACACGCTTCAAGCCGTGGCTCCTTTGCCAGAAACCCTCAAGTGTATGGCATATGTGCCTCTTCTGTCATTGTGCATGGATACAAGTGTCAGGAACACGAGGTTACAACCAATGACGGTTACATTCTGAGCCTGCAAAGGATACCAGAAGGTCGAGTATCATGTTCGATTACTATTGACGACGGTGGATGCATGCAGGATGGTATGACATGGCTTCTGAATCCACCAGAGCAAGACTTGCCTCTGATTTTGGCTGATAATGGCTTTGACGTCTGGATTGCTAACACCAGAGGAACCAGATTTAGCCGCCGACACATCTCATTGGACCCCTCTACACCGGCCTATTGGAATTGGTCTTGGGATGAAATTGTCTCCTATGATCTCCCTGCCGTGTTTAATTATGTGTTCAGCCAAACGGGGCAGAAGATCGATTACGTTGGCCATTCCTTGATCACTACCCTCTTCGGTCTGGCAGAGTTTAATCCAAAAGGGTTAGCTGTTGATGCCTTTCTCAAGTCTCTATGTGCTCACCCTGGGATAGACTGCTATGACTTGTTGACTGCACTAACTGGTAAAAACTGCTGCCTCAATTCCTCAACTGTTGAACTATTCTTGATGAATGAGCCTCAGTCAACATCAACAAAGAACATGGTGCACTTGTCTCAGAGTAAGATTTCCTCATCAACTGTTAGACTTGGGATGTTGACAAAGTACAACTATATGAGACCAGACTATAACATATTGCACTATGGAGAAATATTCCCTCCAATCTACAACCTTTCAAATATCCCTCATGATCTCCCTCTCTTCATCAGCTATGGTGGCAGAGATGCACTCTCAGATGCTCGTGATGTTGAGAAACTGCTTGATAAACTCAAGTTCCATGATGAGGACAAGCGCAGTGTTCAGTTCATTCAGGAGTATGCTCATGCTGACTACATCATGGGGTTCAATGCCAAGGACTTGGTGTATAATTCTGTTCTTTCATTTTTCAACCATCATAGTTAA 1086 0.4457 MALLAGLMSFAALTLFLVLATSVSHQAHASSRGSFARNPQVYGICASSVIVHGYKCQEHEVTTNDGYILSLQRIPEGRVSCSITIDDGGCMQDGMTWLLNPPEQDLPLILADNGFDVWIANTRGTRFSRRHISLDPSTPAYWNWSWDEIVSYDLPAVFNYVFSQTGQKIDYVGHSLITTLFGLAEFNPKGLAVDAFLKSLCAHPGIDCYDLLTALTGKNCCLNSSTVELFLMNEPQSTSTKNMVHLSQSKISSSTVRLGMLTKYNYMRPDYNILHYGEIFPPIYNLSNIPHDLPLFISYGGRDALSDARDVEKLLDKLKFHDEDKRSVQFIQEYAHADYIMGFNAKDLVYNSVLSFFNHHS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1219 361 Pfam Partial alpha/beta-hydrolase lipase region 51 79 IPR006693 GO:0006629
Aed9g1219 361 PIRSF Steryl_ester_lip 4 190 IPR025483 GO:0016788
Aed9g1219 361 PIRSF Steryl_ester_lip 177 361 IPR025483 GO:0016788
Aed9g1219 361 PANTHER LYSOSOMAL ACID LIPASE-RELATED 180 360 - -
Aed9g1219 361 PANTHER LYSOSOMAL ACID LIPASE-RELATED 14 183 - -
Aed9g1219 361 PANTHER TRIACYLGLYCEROL LIPASE 2 14 183 - -
Aed9g1219 361 PANTHER TRIACYLGLYCEROL LIPASE 2 180 360 - -
Aed9g1219 361 Gene3D alpha/beta hydrolase 179 359 IPR029058 -
Aed9g1219 361 Gene3D alpha/beta hydrolase 35 178 IPR029058 -
Aed9g1219 361 SUPERFAMILY alpha/beta-Hydrolases 52 360 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1219 Aed-Chr9 9496801 9503359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1219 1 358 Acyl Lipid Metabolism Gene Families AT2G15230 32.683 2.19e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1219 K01052 - gmx:100779460 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1219 9 9496801 9503359 Aed3g1236 3 10956030 10964565 PCT