Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1210 ATGCATTTTTGTTATTACGATTACGATAAGGATGATAAAACAAGAGTGCACGGTGTTCGCACCTCACATTCCATTCCAATGGCTGCCTCATCCTCCTTCTCCACCACCACACTCTTCTCCTTCCTCCTCCCAGCGAAGCCGCACGCTCCTTCCTTGGTTCGGTTCCCGGTGCAGCAGAGCCACATCAAGCCACGCGCCGCCCAACAGGACCAGCAGGAACTGTCCCTGTCGTCCTCCTACGTGGCGAACCCTTCCCACGCGCACGCGAACACGCTGTTCTTCCGGTCGGCGTACAACGTGCAGGTGGTGGTGGATGAGAACGAGCCGGAGGAGAGGTTGCTCAACCGTTTTCGGAGAGAGGTCATGAGAGCCGGAGTCATTCAGGAGTGCAAGAGGAGGCGCTTCTTCGAGAACAAGCAGGAGGAGAAGAAACGCAAGAACCGCGAAGCTGCCAAGCGTAAAAGCAGAAGCAGGCGCTTTCCATCGAGATTTCAAGCACAAAACAAGCAGGATGTTCCAGTAACCAAGAAGGTAGAGGATGATGATAACTGGGATCTTCCAGAAGCAGACGCTCCGTATATTTCAACTGCATGA 594 0.5387 MHFCYYDYDKDDKTRVHGVRTSHSIPMAASSSFSTTTLFSFLLPAKPHAPSLVRFPVQQSHIKPRAAQQDQQELSLSSSYVANPSHAHANTLFFRSAYNVQVVVDENEPEERLLNRFRREVMRAGVIQECKRRRFFENKQEEKKRKNREAAKRKSRSRRFPSRFQAQNKQDVPVTKKVEDDDNWDLPEADAPYISTA 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1210 197 MobiDBLite consensus disorder prediction 138 197 - -
Aed9g1210 197 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 48 193 - -
Aed9g1210 197 PRINTS Ribosomal protein S21 family signature 111 120 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aed9g1210 197 PRINTS Ribosomal protein S21 family signature 135 145 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aed9g1210 197 PRINTS Ribosomal protein S21 family signature 123 133 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aed9g1210 197 PRINTS Ribosomal protein S21 family signature 103 111 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aed9g1210 197 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 48 193 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aed9g1210 197 Gene3D Ribosomal protein S8 114 152 IPR038380 -
Aed9g1210 197 Hamap 30S ribosomal protein S21 [rpsU]. 99 155 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aed9g1210 197 TIGRFAM S21p: ribosomal protein bS21 100 156 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aed9g1210 197 Pfam Ribosomal protein S21 101 154 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1210 Aed-Chr9 9419637 9421841 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1210 - - gmx:100812464 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1210 9 9419637 9421841 Aed9g1210 9 9419637 9421841 ECH
Aed9g1210 9 9419637 9421841 Aed3g1243 3 11139148 11143012 PCT