Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1160 ATGCCGGAGGAAGAAGTAGTGGAGCTGAAGTTCCGTCTCTACGATGGATCCGATATCGGACCCTTCCGTTACTCCCCAGCTTCCACCGTTGCCATGCTCAAGGACCGGATTTTTGCCGACTGGCCCAAAGACAAGAAAATTACACCAAAGGCAGCAAATGATATAAAGCTGATAAGTGCTGGCAAAATTTTGGAGAACAACAAGACAGTTGGCCAGTGTAGAGTACCTTTTGGCGAGCTTCACAAAGGGGTCATCACCATGCATGTTGTTGTCCAGCCATCTTTGCTCAAAACAAAAACAGAGAAAAAAGTTGATGAGGTACCCAAACCTATATGTGCATGTTCAATATTGTGA 354 0.4548 MPEEEVVELKFRLYDGSDIGPFRYSPASTVAMLKDRIFADWPKDKKITPKAANDIKLISAGKILENNKTVGQCRVPFGELHKGVITMHVVVQPSLLKTKTEKKVDEVPKPICACSIL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1160 117 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Aed9g1160 117 PIRSF MUB 1 117 IPR017000 -
Aed9g1160 117 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 116 IPR040015 -
Aed9g1160 117 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 114 IPR039540 -
Aed9g1160 117 CDD Ubl_MUBs_plant 7 93 - -
Aed9g1160 117 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 1 116 - -
Aed9g1160 117 SUPERFAMILY Ubiquitin-like 2 96 IPR029071 -
Aed9g1160 117 Gene3D - 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1160 Aed-Chr9 8749099 8758433 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1160 - - gmx:100500075 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1160 9 8749099 8758433 Aed9g1160 9 8749099 8758433 ECH