Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1120 ATGATGAATTATTTCCCGGACGAGGTAATAGAGCACATATTTGACTATGTGGTGTCACACCGTGACCGGAATACTCTGTCTCAGGTGTGTAAAAGTTGGTACAGGATAGAGAGGTTTACAAGGAGGAGGGTGTTCATAGGGAACTGTTACTCCATCACTCCGGAGAGGTTGATCCGGAGGTTTCCTTGTGTAAAGTCTTTGACTTTGAAGGGAAAGCCTCATTTTGCTGACTTCAGTTTGGTGCCTTATGATTGGGGTGGTTTTGTGGAGCCGTGGATTGAGGCACTGGCCAAGAGCAGGGTTGGGCTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCTCGTTCTTTCACACACTTCAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTTTCCACCGATGGCCTTGCTGCTGTAGCTGCAAATTGCAGGTTTCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAAGACCACAAAGGCCAGTGGCTAAGTTGCTTTCCTGATAGCTGCACATCACTTGTTTCTCTTAATTTTGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCACTAGAGAGACTTGTGGCCAGATCTCCTAACCTGAAGAGTTTGAAGCTGAATCGTTCGGTGCCCCTCGATGCACTGCAAAGGATAATGATGCGAGCGCCTCAACTAGCAGATTTGGGTATTGGATCATTTGTCCATGATCCAGAATCAGAGGCCTTCATAAAGCTCAAGAATACCATTCTCAAGTGCAAGTCCATAACCAGTTTGTCAGGGTTTTTGGAAGTTGCTCCTCACTGTCTCGAAGCTATATATCCTGTTTGCCTGAACTTAACATCCTTGAACTTGAGCTATGCAGCAGGCATTCAGGGCAGCGATCTGATCAAACTGATTCGCCACTGTGTGAAACTTCAGCGCTTATGGATAATGGATTGCATTGGCGACAAGGGATTAGGTGTTGTAGCTTCGACATGTAAAGATTTGCAAGAATTGAGGGTTTTTCCAGCTCCCTTTGGAAATCCAGCAGCTGTCACAGAAAAAGGGCTGGTTGCAATTTCTGCCGGTTGCCCTAAGCTTCACTCGATACTCTACTTCTGCCACCAGATGACAAATGCTGCACTCATAACAGTGGCTAAGAACTGCCCAAATTTCATCCGGTTCAGGTTGTGCATCCTCGATGCAACAAAACCCGACTCTGATACAATGCAGCCACTGGACAAAGGTTTCGGTGCAATAGTGCAGTCTTGCAGGCAACTCAGGCGCCTATCTCTCTCCGGGAAACTGACTGATCAGGTTTTCCTTTACATAGGAATGTATGCTGAGAAACTTGAGATGCTGTCGATTGCATTCGCTGGGGAGGGTGACAAGGGAATGCTCTCTGTGTTGAACGGATGCAAGAAGCTCAGGAAGCTTGAGATAAGAGACTGCCCTTTTGGCAACGAGGCACTTCTGAAGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGTGAAGTGTCCGTCGGAGCCTGCAAGTTGCTAGCCAAGAAGATGCCAAGGCTGAATGTGGAGATCTTCAATGAAAATGAGCAAGAGGATTGTAGTCTGGAAGATGACCAGAAGGTAGAGAAGATGTATTTGTATCGTACATTGGCTGGGAGAAGGAAAGATGCACCAGAATATGTATGGACGCTGTAG 1716 0.4697 MMNYFPDEVIEHIFDYVVSHRDRNTLSQVCKSWYRIERFTRRRVFIGNCYSITPERLIRRFPCVKSLTLKGKPHFADFSLVPYDWGGFVEPWIEALAKSRVGLEELRLKRMVVSDESLELLSRSFTHFKSLVLVSCEGFSTDGLAAVAANCRFLRELDLQENEVEDHKGQWLSCFPDSCTSLVSLNFACLKGEVSLGALERLVARSPNLKSLKLNRSVPLDALQRIMMRAPQLADLGIGSFVHDPESEAFIKLKNTILKCKSITSLSGFLEVAPHCLEAIYPVCLNLTSLNLSYAAGIQGSDLIKLIRHCVKLQRLWIMDCIGDKGLGVVASTCKDLQELRVFPAPFGNPAAVTEKGLVAISAGCPKLHSILYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDSDTMQPLDKGFGAIVQSCRQLRRLSLSGKLTDQVFLYIGMYAEKLEMLSIAFAGEGDKGMLSVLNGCKKLRKLEIRDCPFGNEALLKDVGKYETMRSLWMSSCEVSVGACKLLAKKMPRLNVEIFNENEQEDCSLEDDQKVEKMYLYRTLAGRRKDAPEYVWTL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1120 571 Pfam F-box 3 43 IPR041567 -
Aed9g1120 571 PANTHER PROTEIN AUXIN SIGNALING F-BOX 3 3 568 - -
Aed9g1120 571 SUPERFAMILY RNI-like 16 539 - -
Aed9g1120 571 Gene3D Ribonuclease Inhibitor 42 571 IPR032675 -
Aed9g1120 571 SMART LRR_CC_2 474 499 IPR006553 -
Aed9g1120 571 SMART LRR_CC_2 284 309 IPR006553 -
Aed9g1120 571 SMART LRR_CC_2 100 124 IPR006553 -
Aed9g1120 571 SMART LRR_CC_2 365 389 IPR006553 -
Aed9g1120 571 SMART LRR_CC_2 425 448 IPR006553 -
Aed9g1120 571 SMART LRR_CC_2 125 150 IPR006553 -
Aed9g1120 571 Gene3D - 1 41 - -
Aed9g1120 571 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 3 568 - -
Aed9g1120 571 SMART fbox_2 5 46 IPR001810 GO:0005515
Aed9g1120 571 Pfam Transport inhibitor response 1 protein domain 62 108 IPR041101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1120 Aed-Chr9 8339706 8343036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1120 - - gmx:100812516 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1120 9 8339706 8343036 Aed9g1120 9 8339706 8343036 ECH