Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1105 ATGAGCAGTTGGAGAAGCCTCGTTCTGCGAATCGGGGACAAGAGCCCTGAATACGGAGCCTCCTCCGACTACAAAGATCACATTGACACGTGCTTTGGCGCCCTTCGCCGCGAGCTCGACCACTCCCAATCCGAGATTCTCGAGTTCCTTTTTGAATGTGCTGAGCAATTGCCTCATAAGATCCCTTTGTATGGAACCCTGATTGGCTTAATTAACTTGGAAAATGAGGACTTTGTGAAACAACTAGTGGAGAAAACTCAAACTAAATTTCAGGATGCTTTGGATTCTGGAAACTGCAACGGGGTTCGTATTCTAATGCGGCTTTTGACTGTTATGATGAGCAGTAAGGTTCTTCAACCAACCTCTTTGGTGGCTGTCTTTGAAACATTTTTATCATCAGCTGCCACAACAGTAGATGAGGAAAAAGGGAATCCCTTATGGCAGCCATGTGCTGACTTTTACATAACTTGCATATTATCATCCCTCCCATGGGGTGGAGCAGAACTTATTGAGCAAGTTCCTGAAGATATTGAGAGAGTGATGGTTGGTGTAGAAGCTTACTTGAGCATCAGAAAACATACATATGATACTGGTTTATCCTTTTTCGAGAATGATGATGAAAATGGGAAAGGTCTTAGTGACAAGGATTTTTTGGAAGATTTATGGGATAGAATACAGGTTTTATCAAGCAATGGATGGAAAGTTGAAAGTGTTCCAAGACCTCATCTTTCATTTGAAGCCCAGCTGGTTGCTGGGAAGTCTCATGAATTTGCACCAATAAGCTGCCCCAGCTTACCAAGCCCACCTTCAGTCCCTTCTGGCGTGTCTATTGGTAAACAGAAGCATGAAGCAGAACTAAAATACCCCCAAAGAATACACCGGCTAAACATATTTCCTCCTAGTAAACACGAGGATCTACAGCCTGTAGACAGATTTGTTATGGAAGAGTATCTCCTAGATGTGCTTCTTCGAAAGGAATGTGCCTCTTTCATGGTTGGCCTGCCAGTTTCCTTCAGATATGAGTATCTCATGGCTGAGACAATATTCTCTCAGCTGCTGATGCTACCACAACCACCTTTCAAACCTGTGTATTACACACTGGTTATTATTGACCTTTGTAAGGCTCTTCCTGGAGCTTTTCCTGCAGTTGTAGCTGGAGCAGTCCGTACTCTCTTTGAGAGGATTGCTGATTTGGATATGGAGTGTCGGACACGTCTGATCCTTTGGTTCTCACACCATTTATCAAACTTCCAGTTCATCTGGCCGTGGGAAGAGTGGGCTTATGTCCTAGACCTCCCGAGGTGGGCCCCTCAACGTGTCTTTGTTCAGGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGTATTGAAAATGCACCTGGTTTAGAAGAATTGCTTCCTCCAAAGGGTGGCCCAATCTTTAGTTTTGGTGCAGAAGATGGTAAAGAAAGCAATGAACATGTACTGTCCGGACAGCTCAACAACATGGTTAAAGGGAAGTCGCCTGTCCGTGAAATAATCTCATGGATTGATGAAAGTGTGTTTCCAAATAATGGTCTAGAAGTTACCCTCAGAGTGGTTGTACAAACTCTTCTCAATATTGGATCCAAGAGTTTCACTCATTTGATAACTGTCTTAGAAAGATATGGGCAAGTCTTTGCAAAAGTATGTCCGGACCAGGATAAGCAAGTCATGCTGATAGCTGAAGTGAGTTCTTTCTGGAAGAGTAACACCCAAATGACAGCAATTGCTATTGACAGGATGATGGGATATCGACTTGTATCAAATCTGGCTATTCTGAGATGGGTCTTCTCTGCAGAAAATATTGAGCTATTTCACACATCAGATCGTCCATGGGAGATTCTTAGAAATACAGTAAGCAAGACACACAATCGTATTTTTGATCTAAGGAAAGAAATATTATCTCTTAAAAAGAATATTTCATCAGCTGAAGAAGCTGCCAAGGTGGCAAAAGCAGAGTTAGATGCTGCAGAGTCAAAACTTACACTAGTGGATGGCGAACCAGTTCTTGGTGACAATCCTGCTAGATTGAATAGATTGAAATCACATGCTGAAAAGACAAAGGAGGAGGTGGTGTCTCTTCAAGAATCTTTAGAAGCTAAGGAAGCTCTTCTTGCCCGAGCAATTGAGGAAAATGAGGCATTGTTTGTCTTGTTGTACAAAAGCTTCTCAAACGTGTTGACAGAGCGCCTTCCTGAAGGAGCTAGAACACTGAATGAGTTGAAGTCTGCACAAGTTGATGTGGTGATGGCAGTGGACCCTGAAGAGCCATCATCGATGGAATTAGACAATGAGAATCAGGGACCTCTAAACAGTCAGACGAATGGCGAGAAGAAAGGTGGTGCTTACAATGTAGCTGAAAAGGAGCAGTGGTGTATCACCACTTTGGGCTATGTGAAGGCCTTTTCTAGGCAGTATGCTGCTGAGATATGGCCCCATGTTGAAAAGTTGGATGCAGAGGTGTTGACAGAAGATGCACCTCTTCTTTTTCGGTCAGCTGTTTATTCTGGTCTTCGAAGACCAATTCAGGAGGCTTGA 2577 0.4342 MSSWRSLVLRIGDKSPEYGASSDYKDHIDTCFGALRRELDHSQSEILEFLFECAEQLPHKIPLYGTLIGLINLENEDFVKQLVEKTQTKFQDALDSGNCNGVRILMRLLTVMMSSKVLQPTSLVAVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSSLPWGGAELIEQVPEDIERVMVGVEAYLSIRKHTYDTGLSFFENDDENGKGLSDKDFLEDLWDRIQVLSSNGWKVESVPRPHLSFEAQLVAGKSHEFAPISCPSLPSPPSVPSGVSIGKQKHEAELKYPQRIHRLNIFPPSKHEDLQPVDRFVMEEYLLDVLLRKECASFMVGLPVSFRYEYLMAETIFSQLLMLPQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPKGGPIFSFGAEDGKESNEHVLSGQLNNMVKGKSPVREIISWIDESVFPNNGLEVTLRVVVQTLLNIGSKSFTHLITVLERYGQVFAKVCPDQDKQVMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAILRWVFSAENIELFHTSDRPWEILRNTVSKTHNRIFDLRKEILSLKKNISSAEEAAKVAKAELDAAESKLTLVDGEPVLGDNPARLNRLKSHAEKTKEEVVSLQESLEAKEALLARAIEENEALFVLLYKSFSNVLTERLPEGARTLNELKSAQVDVVMAVDPEEPSSMELDNENQGPLNSQTNGEKKGGAYNVAEKEQWCITTLGYVKAFSRQYAAEIWPHVEKLDAEVLTEDAPLLFRSAVYSGLRRPIQEA 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1105 858 Gene3D - 485 842 - -
Aed9g1105 858 Pfam MIF4G like 338 462 IPR015172 GO:0016070
Aed9g1105 858 Pfam MIF4G like 496 822 IPR015174 GO:0016070
Aed9g1105 858 Coils Coil 690 724 - -
Aed9g1105 858 SUPERFAMILY ARM repeat 294 473 IPR016024 -
Aed9g1105 858 Coils Coil 855 858 - -
Aed9g1105 858 Coils Coil 639 673 - -
Aed9g1105 858 Gene3D - 3 269 - -
Aed9g1105 858 Gene3D - 299 476 - -
Aed9g1105 858 MobiDBLite consensus disorder prediction 774 790 - -
Aed9g1105 858 SMART if4_15 1 229 IPR003890 GO:0003723|GO:0005515
Aed9g1105 858 SUPERFAMILY ARM repeat 2 296 IPR016024 -
Aed9g1105 858 SUPERFAMILY ARM repeat 473 840 IPR016024 -
Aed9g1105 858 MobiDBLite consensus disorder prediction 769 790 - -
Aed9g1105 858 PANTHER CAP BINDING PROTEIN 2 854 IPR027159 GO:0000339|GO:0005846|GO:0006406
Aed9g1105 858 Pfam MIF4G domain 21 218 IPR003890 GO:0003723|GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1105 K12882 - gmx:100811738 1585.85