Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1094 ATGGGTGAAGCCGCCGCCATTCCTCAATGTTTTCAGCATCTAATGGCGAAAAAGTTGCTCTTTTTGTTGACCCTTTTGGAAATTCTCCTTTTGGGGCAATCCAAGTTTATGGTTTACAACACTTCCCAGAGCACAGTCCCTGGGAAGCTCAACGTTCATCTGGTGGCTCACACCCACGATGATGTTGGTTGGTTGAAAACCGTTGATCAGTACTATGTTGGTTCTAACAATTCAATTCAGGGGGCTTGTGTGCAAAATGTGTTGGACTCCATGGTGCCTGCTCTTTTGGCTGACAAGAACAGAAAATTTATCTATGTTGAGATGGCTTTTTTCAAGCGATGGTGGAGAGATCAAAGTGAAGCCGTTCAGGATGTAGTTAAGAAACTCGTTAGTTCGGGTCAACTAGAGTTCATAAATGGTGCCATGGCTATGCATGATGAGGCAGTAACACATTACATAGACATGATTGATCAGACTGCACTTGGACATCAATTTCTAAAAGAGGAATTTGGTGTGACTCCCAGAATTGGTTGGCAAATTGATCCTTTTGGACATTCTGCTGTGCAAGCTTACCTGTTGGGAGCTGAAGTTGGCTTTGACTCATTTTTCTTTGGTCGGATAGATTACCAAGATAGGGCTAAGCGTAAAAAGGAAAAGAGTCTTGAGGTTATCTGGCAGGGTAGCAAGAGCCTTGGCTCCTCTGCCCAGATCTTTGCTGGAGCATTCCCTGAAAATTATGAGCCACCTTCAGGATTTTACTTTGAAGTTAATGCTGACTCACCAATAGTTCAAGATAACGTGGAATTGTTTGATTACAATGTCCAAGATCGAGTGAATGACTTTGTTGCTGCTGCATTATCACAGGCAAACATAACTCGAACAAATCACATAATGTGGACAATGGGAACTGACTTTAAGTATCAATATGCACATACATGGTTCCGACAGCTGGACAAGCTTATTCATTATGTAAACATGGATGGACGTGTCAATGCTCTGTACTCTACACCATCCATATATACTGATGCAAAATATGCTACAAATGAGTCCTGGCCAATCAAGACTCATGATTTCTTCCCTTATGCAGATCGAGCAAATTCTTACTGGACAGGATACTTTACCAGTAGGCCAGCTTTCAAACACTATGTCAGATTAATGAGTGGCTATTATTTGGCTGCAAGACAACTAGAATTTTTTAGGGGGAGAGTGAATTCAGGGCCAAATACAGACTCATTAGCTGATGCTTTAGCAATTGCGCAACACCATGATGCAGTCACTGGCACAGAAAAGCAGCATGTGGCTAATGATTATTCTAAACGATTGTCAATAGGCTACAAAGAGGCAGAGTATTTGGTTTCATCATCGCTGGCTAGCTTGGTTGAGTCACCGTTGCTTCCTAGATGCCAAAACCCAGTTACAAAGTTTCAACAATGTCCACTTTTGAACATTAGTTACTGTCCTGCATCAGAAGTTGATCTGGTTCAAGGAAAGAATTTGGTTATTGTGGTTTACAACTCTCTAGGTTGGAAGAGGAATGAAGTGATTCGGATTCCGGTTATTGAGGCCAATGTTAGAGTTCGTGACTCTAATGGTATAGAAATAGAATCTCAACTTCTTCCTCAGGCTGAGAAATATGTAGACTTAAGAAACTACTACGTGAAGGCATATCTGGGACAAACTCCACCCAAGACACCCAAGTACTGGCTTGCATTTACAGTTTCTGTACCACCCCTTGGTTTTAGCACCTACACTGTCTCAACTGCCAAAAGGACAGGGTCCATAAGATCATCAGTAGATATATATAAAAGAAGTGAAAAGTCTAAATTTGAAGTTGGCCAAGGAAATTTGAAGCTTACATTTTCTACGGATCAAGAGAAGTGTACCAATTATGTTAATAGAAGAAACCTGAATGCTGGGGCCTATATCTTCCGTCCAAATGGCACACATCCCATAAACCATGAAAAGAAGGTTCCATTGACTGTTTTGCATGGACCAGTACTAGATGAAGTGCATCAACAAATCAATCCATGGATATACCAGATTACCAGACTATACAAAGGAAAGGAGCACGTTGAAGTGGAGTTTATTGTTGGCCCTATACCGATTGAAGATGGAATTGGTAAAGAAGTTGCTACTCGGATTTCAACTACTATGGAAACCAACAAAACATTTTACACAGATTCTAATGGGCGTGATTTTATCAAAAGGATACGTGACTACAGAACAGACTGGGACCTGGAAGTGAACCAACCCGCTGCTGGAAATTATTATCCTCTGATGGTCCACAGGAGATTACTACTTGATGATTCAAGAGGTGTTGCAGAGGCTCTAAATGAAACAGATTGTGTTGGTGATGATTGCAGGGGTCTAACTGTCCAAGGTAAATATTACTACAGAATAGATCCCTTGGGTGAGGGCGCTAAGTGGCGTCGTACTTTTGGCCAGGAAATATATTCTCCACTTCTGTTAGCCTTTGCTGAAAAGGATGATATAGATGACTGGATGAATTCCCGTGTATTAACATTTTCAGGAACTGATTCTTACGCATTACCTGATAATATTGCTATTATAACATTACAGGAACTTCATGATGGGACAGTTCTCCTTCGGTTAGCACATCTATATGAGATCAAGGAGGTGAAGGAGATGAACTTATCTGCCAATCAAGAAAGGAAAGAGATGGAGAAAAAAAGACTTGCTTGGAAAGTAGAAGGCTCTTCTGGAAATAAACATGTTTCAAGGGGAGGGCCAGTTGATCCAAAAGAGCTAAACGTGGAGCTTGCTCCAATGGAAATCCGCACTTTTATCATTGACTTTGATGATGTGTCTACCTCTAACCAACTTTTTGATGCATTGTAG 2859 0.4117 MGEAAAIPQCFQHLMAKKLLFLLTLLEILLLGQSKFMVYNTSQSTVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSMVPALLADKNRKFIYVEMAFFKRWWRDQSEAVQDVVKKLVSSGQLEFINGAMAMHDEAVTHYIDMIDQTALGHQFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSFFFGRIDYQDRAKRKKEKSLEVIWQGSKSLGSSAQIFAGAFPENYEPPSGFYFEVNADSPIVQDNVELFDYNVQDRVNDFVAAALSQANITRTNHIMWTMGTDFKYQYAHTWFRQLDKLIHYVNMDGRVNALYSTPSIYTDAKYATNESWPIKTHDFFPYADRANSYWTGYFTSRPAFKHYVRLMSGYYLAARQLEFFRGRVNSGPNTDSLADALAIAQHHDAVTGTEKQHVANDYSKRLSIGYKEAEYLVSSSLASLVESPLLPRCQNPVTKFQQCPLLNISYCPASEVDLVQGKNLVIVVYNSLGWKRNEVIRIPVIEANVRVRDSNGIEIESQLLPQAEKYVDLRNYYVKAYLGQTPPKTPKYWLAFTVSVPPLGFSTYTVSTAKRTGSIRSSVDIYKRSEKSKFEVGQGNLKLTFSTDQEKCTNYVNRRNLNAGAYIFRPNGTHPINHEKKVPLTVLHGPVLDEVHQQINPWIYQITRLYKGKEHVEVEFIVGPIPIEDGIGKEVATRISTTMETNKTFYTDSNGRDFIKRIRDYRTDWDLEVNQPAAGNYYPLMVHRRLLLDDSRGVAEALNETDCVGDDCRGLTVQGKYYYRIDPLGEGAKWRRTFGQEIYSPLLLAFAEKDDIDDWMNSRVLTFSGTDSYALPDNIAIITLQELHDGTVLLRLAHLYEIKEVKEMNLSANQERKEMEKKRLAWKVEGSSGNKHVSRGGPVDPKELNVELAPMEIRTFIIDFDDVSTSNQLFDAL 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1094 952 Gene3D Glycoside hydrolase 38, N terminal domain 50 330 IPR027291 -
Aed9g1094 952 Gene3D - 585 759 - -
Aed9g1094 952 Gene3D - 760 819 - -
Aed9g1094 952 SUPERFAMILY Glycoside hydrolase/deacetylase 39 363 IPR011330 GO:0005975
Aed9g1094 952 Pfam Glycosyl hydrolases family 38 C-terminal domain 584 759 IPR011682 GO:0004559|GO:0006013
Aed9g1094 952 Pfam Glycosyl hydrolases family 38 N-terminal domain 51 362 IPR000602 GO:0004559|GO:0006013
Aed9g1094 952 PANTHER ALPHA-MANNOSIDASE 28 941 - -
Aed9g1094 952 CDD GH38N_AMII_LAM_like 50 326 - -
Aed9g1094 952 Gene3D - 477 584 IPR013780 -
Aed9g1094 952 SUPERFAMILY Galactose mutarotase-like 466 939 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aed9g1094 952 SMART Alpha_mann_mid_2 367 441 IPR015341 GO:0004559|GO:0006013
Aed9g1094 952 Gene3D Glycoside hydrolase family 38, central domain 331 409 IPR037094 GO:0004559|GO:0006013
Aed9g1094 952 Gene3D - 840 877 - -
Aed9g1094 952 Gene3D - 878 942 - -
Aed9g1094 952 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 853 936 IPR041147 -
Aed9g1094 952 SUPERFAMILY Families 57/38 glycoside transferase middle domain 366 460 IPR028995 -
Aed9g1094 952 Pfam Alpha mannosidase middle domain 367 459 IPR015341 GO:0004559|GO:0006013
Aed9g1094 952 Gene3D Glycoside hydrolase family 38, central domain 410 463 IPR037094 GO:0004559|GO:0006013
Aed9g1094 952 PANTHER ALPHA-MANNOSIDASE 28 941 - -
Aed9g1094 952 Coils Coil 877 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1094 Aed-Chr9 8115468 8128142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1094 15 876 Glycoside Hydrolase AT5G13980 68.177 0.0 1297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1094 K01191 - gmx:100776282 1727.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1094 9 8115468 8128142 Aed9g1094 9 8115468 8128142 ECH