Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1093 ATGGTCAATGCGGTGGCAGTGGTTTTCGCCGTTTTCGCGGCGGCGTCGGCGATGAATTGGGTTGCGGAATCAGAGTACATAGAGTACAACACGACGCAGAGGATAGTGGCAGAGAAATTAAACGTGCACTTGGTACCTCACTCCCACGACGATGTTGGCTGGCTCAAAACCGTCGATCAGTACTACGTTGGAGCCAACAACTCCATTCGGGGTGCATGTGTGCAGAACGTGCTGGATTCTATGATATCTGCTCTCTTGGAGGACAACAATCGCAAGTTCATCTATGTTGAGATGGCATTTTTCCAGAGATGGTGGAGACAGCAAAGTAAATCAATGAAAGTTAAAGTCAAGGAGCTGGTCAACTCGGGTCAGTTGGAATTCATAAATGGGGCTATGTGTATGCATGACGAGGCCACCCCGCATTACATTGATCTAATTGACCAGACCACTCTCGGGCATCAATTTATCAAAGATGAATTTGGTAAGGTTCCAAGAGTTGGTTGGCAGATTGACCCATTTGGCCATTCTGCAGTTCAGGCTTACTTGCTTGGTGCTGAGCTAGGATTCGATTCACTCTTTTTTGCTAGAATCGATTACCAAGATAGAGCCAAGCGATTGAAGGAGAAGACTCTTGAGGTTATTTGGCAGGGTTCCAGGTCTCTTGGCTCTTCTTCACAAATATTTACTGGGATATTTCCCAGGCATTATGATCCTCCTGATGGTTTCACATTTGAGATAAATGATGTTTCCCCGCCTATTCAGGATGACATTCTACTATTTGACTATAATGTTCAAGAAAGGGTCAATGATTTTGTATCTGCTGCCTTAGCTCAGGCTAATGTGACCAAAACAAATCACATTATGTGGGCAATGGGGACAGACTTCCGTTATCAATATGCTAATTCATGGTTCAGGCAGATGGATAAGTTTATTCACTACATCAATCAGGATGGGCGTGTCAATGCATTATATTCAACACCATCTATCTACACTGATGCAAAATATGCAGCTAATGAGTATTGGCCTCTTAAAGTTGATGATTTCTTCCCGTATGCAGATCACCCAAATGCATATTGGACTGGATATTTTACAAGTAGGCCAGCTTTGAAGGGCTATGTGAGAGTGATGAGTGCTTACTATCAGGCAGCAAGGCAATTGGAATATTTTAAAGGGAGGAATGAAACAGGACCAAATATTGATGCATTAGCTGATGCTTTAGCAATTGCTCAGCACCATGATGCAGTTAGTGGTACAGAAAGGCAACATGTTGCTTCTGATTATGCACTGCGACTCTCCATGGGATATAAAGAGGCAGAAAGGTTGGTTGCATCTGCACTTGCTTCCTTGTGTCCTCTTCTTAATATAAGTTACTGTCCTCCATCAGAATCTATGTTGATTAATGGAAAGAGCTTGGTGATTGTTGTTTATAATCCTCTTGCTTGGAAAAGGGAAGATGTAATTCGAATTCCTGATTTTGCTGGGAAGAAAATTGAGTCTCAGCTTCTGCCTCTGTCTAATGCTACTTTGACTATAAGAAAATATTATGTCAGAGCATACCTAGGAAAAGCTCCTGGGGGCGACGAACTCAAGTATTGGCTTGCATTTCCAGTGTCTGTACCTCCCCTTGGTTTCAGAACCTATATAGTGTCATGCTCTAAACAAAGTCATAGTTCAACTATCTCAAAGATATATAGATCAGAAGGAACTACTGATAAAAGCATAGAAGTTGGACAGGGGAATCTAAAGCTACTTTATTCAGCAAATGAAGGAAAACTGACTCACTATGCAAACAGTAGAACTCTGGTTACAACATCAGTTGAACAATCATACAGTTATTATTCTGGAAATGATGGGACTGATAAAGATCCTCAGGCTTCTGGGGCATATGTCTTCCGTCCAAATGGCTCGTTTCCCATTAAATCAGATCATAAGGCATCTTTTACTGTCCTGCGTGGTCCAATATTAGATGAAGTACATCAACAGCTCAATCCATGGGTATCCCAGATTACGAGGATATTCAAGGGAAAAGAGCATGCTGAAATTGAGTTCACAGTTGGGCCTATACCTGTTGATGATGGCATTGGGAAAGAAATTATTACTCAATTTAAAACTACAATGAAGACCAACAAGACATTCTACACAGATTCTAATGGACGTGACTTCATTAAGAGGATTCGAGATTTCAGGACTGACTGGGATCTACAAGTGAACCAACCCATAGCTGGAAACTATTACCCAGTTAATTTAGGAATATATGTGCAAGATAGTAGTATGGAATTCTCTGTGTTGGTGGACCGCTCATTTGGGGGTTCAAGCTTGGAAGATGGCCAAATAGAGCTGATGCTCCACAGGAGGTTGCTTCATGATGATGCAAGAGGTGTAGGTGAGGTACTCAATGAAACAGTTTGCACTGCTGATAAGTGTGAGGGCTTAACGATTCAAGGAAAATTGTACCTCAGAATTGACCATAAAGGTGAAGGTGCTAAGTGGCGTCGCACAGTTGGCCAGGAATTATATTCACCATTGCTGTTGGCCTTCACAGAACAGGATGGGGATAATTGGTTGCATATCAGTCGATCAACATTTTCTGGCATAGATTCTTCCTACAGTTTACCTGACAACACTGCTCTATTAACCCTCCAAGAATTTAAAAATGGAAAAGTACTCCTAAGATTGGCGCACCTTTATGAGGTTATTGGAGAGGACAAAAATTACTCAGTATCGGCAAGTGTGGAATTGAAAAAGTTGTTTCCTAAGAAGAAGATAAACAAAGTGACAGAGACGAGTTTGTCTGCTAATCAAGAAAGAGCTGAAATGGAAAAGAGGAAGTTAGATTGGAAGGTAGAAGGCTCCACTGAAGAACCTAAGGTGGTGAGGGGAGGACCTGTTGATCCTACGAAGTTGGTGGTTGAACTTGCTCCAATGGAGATTAGGACATTCTTTATTGACTTTGATCCCCTCCAAACAGTTCCTGAAGCTGAAAATCATGTGGCAATGTAA 3000 0.419 MVNAVAVVFAVFAAASAMNWVAESEYIEYNTTQRIVAEKLNVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSMISALLEDNNRKFIYVEMAFFQRWWRQQSKSMKVKVKELVNSGQLEFINGAMCMHDEATPHYIDLIDQTTLGHQFIKDEFGKVPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKEKTLEVIWQGSRSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDILLFDYNVQERVNDFVSAALAQANVTKTNHIMWAMGTDFRYQYANSWFRQMDKFIHYINQDGRVNALYSTPSIYTDAKYAANEYWPLKVDDFFPYADHPNAYWTGYFTSRPALKGYVRVMSAYYQAARQLEYFKGRNETGPNIDALADALAIAQHHDAVSGTERQHVASDYALRLSMGYKEAERLVASALASLCPLLNISYCPPSESMLINGKSLVIVVYNPLAWKREDVIRIPDFAGKKIESQLLPLSNATLTIRKYYVRAYLGKAPGGDELKYWLAFPVSVPPLGFRTYIVSCSKQSHSSTISKIYRSEGTTDKSIEVGQGNLKLLYSANEGKLTHYANSRTLVTTSVEQSYSYYSGNDGTDKDPQASGAYVFRPNGSFPIKSDHKASFTVLRGPILDEVHQQLNPWVSQITRIFKGKEHAEIEFTVGPIPVDDGIGKEIITQFKTTMKTNKTFYTDSNGRDFIKRIRDFRTDWDLQVNQPIAGNYYPVNLGIYVQDSSMEFSVLVDRSFGGSSLEDGQIELMLHRRLLHDDARGVGEVLNETVCTADKCEGLTIQGKLYLRIDHKGEGAKWRRTVGQELYSPLLLAFTEQDGDNWLHISRSTFSGIDSSYSLPDNTALLTLQEFKNGKVLLRLAHLYEVIGEDKNYSVSASVELKKLFPKKKINKVTETSLSANQERAEMEKRKLDWKVEGSTEEPKVVRGGPVDPTKLVVELAPMEIRTFFIDFDPLQTVPEAENHVAM 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1093 999 Gene3D - 858 986 - -
Aed9g1093 999 SUPERFAMILY Families 57/38 glycoside transferase middle domain 356 449 IPR028995 -
Aed9g1093 999 Coils Coil 922 942 - -
Aed9g1093 999 SUPERFAMILY Galactose mutarotase-like 449 984 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aed9g1093 999 SUPERFAMILY Glycoside hydrolase/deacetylase 29 355 IPR011330 GO:0005975
Aed9g1093 999 Pfam Glycosyl hydrolases family 38 C-terminal domain 578 792 IPR011682 GO:0004559|GO:0006013
Aed9g1093 999 Gene3D Glycoside hydrolase family 38, central domain 400 450 IPR037094 GO:0004559|GO:0006013
Aed9g1093 999 SMART Alpha_mann_mid_2 357 431 IPR015341 GO:0004559|GO:0006013
Aed9g1093 999 Pfam Glycosyl hydrolases family 38 N-terminal domain 41 352 IPR000602 GO:0004559|GO:0006013
Aed9g1093 999 Pfam Alpha mannosidase middle domain 357 449 IPR015341 GO:0004559|GO:0006013
Aed9g1093 999 PANTHER ALPHA-MANNOSIDASE 17 988 - -
Aed9g1093 999 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 875 981 IPR041147 -
Aed9g1093 999 Gene3D Glycoside hydrolase 38, N terminal domain 40 320 IPR027291 -
Aed9g1093 999 CDD GH38N_AMII_LAM_like 40 316 - -
Aed9g1093 999 Gene3D - 573 840 - -
Aed9g1093 999 PANTHER ALPHA-MANNOSIDASE 17 988 - -
Aed9g1093 999 Gene3D Glycoside hydrolase family 38, central domain 321 399 IPR037094 GO:0004559|GO:0006013
Aed9g1093 999 Gene3D - 451 551 IPR013780 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1093 Aed-Chr9 8100061 8112701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed9g1093 24 930 Glycoside Hydrolase AT3G26720 72.591 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1093 K01191 - gmx:100795651 1847.02