Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1073 ATGTCGTCTGTGCCAGCACGAACAGGGCGACAAAGACAGCGTTATGAGGACAATATGCGCCTTGTCTCCGGATGTATTCCCTATAGATGGAAAAAGGACAACACAGATCATCAAATGGGGGAAACGGTGGAAATATTAGAAGTACTTATGATTTCTTCACCAAAACGTGATGACCTTGTATTCCCTAAGGGTGGATGGGAGGATGATGAGACTGTTACAGAAGCTGCTTGCCGTGAAGCTTTAGAGGAAGCAGGAGTTAAAGGAATACTAAGAGAAATTCCATTAGGAATATGGGAGTTCAGAAGCAAAAGCAATGAAGACTTATGCAGCATGGAAGGAGGCTGCAGAGGATACATGTTCGCCTTGGAGGTGACTGAAGAACTCGAGATATGGCCAGAGCAGAACAACCGCACTCGCCAATGGTTAAACATAAAAGAGGCATTCAGACTCAGCCGCTATGACTGGATGTGTAATGCACTTGAGGCGTTTTTGAGAGTAATGGAAGAGGACAGAAAGATTGAGAAGCAAGACAAGAATGTTGAACTAGAAGATGTGTCAGAATGCCAAAGTATGTCACCTAACTGCTACAAAAGATCCTCTAATATGCAGCACCATGGTATGCCTCCTAAAGCCAATCTTCTGTCACGTGCTACTCAAGAAATAGCCATCCACTTTGGTTATTGA 684 0.4401 MSSVPARTGRQRQRYEDNMRLVSGCIPYRWKKDNTDHQMGETVEILEVLMISSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKSNEDLCSMEGGCRGYMFALEVTEELEIWPEQNNRTRQWLNIKEAFRLSRYDWMCNALEAFLRVMEEDRKIEKQDKNVELEDVSECQSMSPNCYKRSSNMQHHGMPPKANLLSRATQEIAIHFGY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1073 227 Pfam NUDIX domain 48 155 IPR000086 -
Aed9g1073 227 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 167 - -
Aed9g1073 227 ProSitePatterns Nudix box signature. 64 85 IPR020084 GO:0016787
Aed9g1073 227 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 191 - -
Aed9g1073 227 CDD Nudix_Hydrolase_9 21 156 - -
Aed9g1073 227 SUPERFAMILY Nudix 15 172 IPR015797 -
Aed9g1073 227 ProSiteProfiles Nudix hydrolase domain profile. 18 164 IPR000086 -
Aed9g1073 227 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1073 Aed-Chr9 7892648 7897080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1073 K07766 - gmx:100794003 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1073 9 7892648 7897080 Aed9g1073 9 7892648 7897080 ECH