Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed9g1070 ATGGCTTCTTCTTGTTCTTATTCTTATTCTTGTCTTCTCCCAAGGCCACACATTCACACACCCCTCATCTCCAAACTCACCTCTTCCCCAAGAACATGGAGCCTCTTCATCCTCACACGCCCCAAACACAAAAGGAACAATCTTTCACTCTCCCCCACCAATGCAGTCTACACCCAAACCCCCTACACCCCTCCCACACCCTCCAAGACCACCACCACAGCCGAAACCCACACCACCAGCAGCGACCCCATCGCCGTCCTCAACGAGAGAATCCGCCGCGACTTCAGCAAAAAAGAGGCTTTCAGAACGGCCATGGATTCCGAGGAGGCCGGAAAGTACATGCGGATGGTGAAGGCCCAGCAGCAGAGAGGCCTGCAGAAGCTCAAGGGCGACAGAGGCGAGTCCAAAGATGGTGTCTTTAGCTACAAGGTCGACCCTTACACGCTCCGCTCCGGGGATTATGTGGTGCACAGGAAGGTCGGCGTTGGGAGGTTTGTGGGGATGAGATTTGATGTTGCCAAGAACTCTGAGCATCCCACCGAGTATGTTTTTATTGAGTATGCTGATGGCATGGCTAAGCTCCCTGTCAACCAGGCTGCTAAAATGCTCTACAGATATAGCCTGCCAAATGAAACCAAGAAGCCTAGGGCTTTGAGCAAGTTGAGTGATACCAGTGCATGGGAGAAAAGAAAGGTTAAAGGAAAGGTTGCGATACAGAAGATGGTTGTGGACTTGATGGAGCTCTATCTACATAGGCTCAAACAAAGAAGGCCTCCCTATCCAAAGAGTCCTGCGTTGGGCGAATTCGAAGCTCAGTTTCCTTATAAACCCACACCAGATCAGAAACAGACCAAAGCAGAGAAAGAAGTGAACTTGGACATGATTAAGAATGGTATCCTGAATATTATTGTTGGGACTCATTCACTCCTAGGAGACCGTGTTACATATAACAATCTTGGTTTGCTTGTGGTTGATGAGGAGCAGAGGTTTGGTGTCAAACAGAAGGAGAAGATTGCTTCTTTCAAAACTTCTGTGGATGTACTTACTTTATCTGCAACCCCCATACCACGAACTCTTTATTTAGCATTAACAGGGTTTCGTGATGCTAGTTTAATTTCAACTCCACCTCCAGAAAGGGTTCCTATCAGGACTCACCTTTCTTCGTTCAGTGAGGACAAAGTAATATCAGCCATCAAGTATGAGCTAGATCGTGGTGGTCAAGTTTTTTATGTTCTGCCACGTATTAAAGGACTTGATGAAGTAATGTTATTTCTTGTAAAGTCATTTCCAAATGTGGAAATAGCTATTGCCCATGGGAAGCTATACTCAAAGCAATTAGAGGATACCATGGAGAAGTTTGCTCTAGGTGAAATAAAAATCCTTATCTGCACAAATATAGTTGAAAGTGGGCTTGATATTCAAAATGCAAATACCATAGTTATTCAGGATGTTCAACAATTTGGCCTTGCACAGTTGTACCAGTTGCGTGGAAGGGTTGGGCGAGCAGATAAGGAAGCACATGCATACTTATTTTACCCTGACAAAGGCCTGCTTTCTGATCAAGCATTGGAGAGGCTTGCTGCTATTGAAGAATGCCGTGAACTTGGTCAAGGCTTTCAACTAGCTGAGAAAGACATGGGTATAAGAGGTTTTGGTGCAATTTTTGGTGAACAACAATCAGGAGATGTTGGAAATGTTGGTATTGATCTTTTCTTTGAGATGCTCTTCGAGAGCTTGTCCAAGGTTGAAGATCACCGTGTTGTTTCAGTTCCTTATCACTTGGTGCAGGTTGAGATAAACTTCAATCCTCATCTCCCTTCTGACTACATTAATTATCTGGAGAACCCTATGAAAATAATAAATGATGCTGAGAGAGTTGCTGAGAAAGACATCTGGAGTCTGATGCAATTTACAGAGAATTTGCGCCGCCAATATGGCAAAGAGCCTCGCTCCATGGAGATTTTACTAAAGAAGCTTTACTTGAGGAGAATGGCAGCTGATTTAGGGATAACCAGAATTTACGCTTTAGGGAAGATGATCTTTATGAAAACAAACATGAGTAAAAAGGTATTCAAGTTGATGGCAGAGTCCATGGCATCAGATTTACATAGAAAGTCATTGGTTCTAGAGGGGGACCAAATTAAGGCTGAACTTCTATTAGAGCTACCAAAAGAACAACTTCTTAATTGGATCTTTCAATGCTTATCTGAACTTCATGCTTCACTACCTTCTTTCATAAAGTACTAG 2247 0.4393 MASSCSYSYSCLLPRPHIHTPLISKLTSSPRTWSLFILTRPKHKRNNLSLSPTNAVYTQTPYTPPTPSKTTTTAETHTTSSDPIAVLNERIRRDFSKKEAFRTAMDSEEAGKYMRMVKAQQQRGLQKLKGDRGESKDGVFSYKVDPYTLRSGDYVVHRKVGVGRFVGMRFDVAKNSEHPTEYVFIEYADGMAKLPVNQAAKMLYRYSLPNETKKPRALSKLSDTSAWEKRKVKGKVAIQKMVVDLMELYLHRLKQRRPPYPKSPALGEFEAQFPYKPTPDQKQTKAEKEVNLDMIKNGILNIIVGTHSLLGDRVTYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIRTHLSSFSEDKVISAIKYELDRGGQVFYVLPRIKGLDEVMLFLVKSFPNVEIAIAHGKLYSKQLEDTMEKFALGEIKILICTNIVESGLDIQNANTIVIQDVQQFGLAQLYQLRGRVGRADKEAHAYLFYPDKGLLSDQALERLAAIEECRELGQGFQLAEKDMGIRGFGAIFGEQQSGDVGNVGIDLFFEMLFESLSKVEDHRVVSVPYHLVQVEINFNPHLPSDYINYLENPMKIINDAERVAEKDIWSLMQFTENLRRQYGKEPRSMEILLKKLYLRRMAADLGITRIYALGKMIFMKTNMSKKVFKLMAESMASDLHRKSLVLEGDQIKAELLLELPKEQLLNWIFQCLSELHASLPSFIKY 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed9g1070 748 Pfam Helicase conserved C-terminal domain 396 502 IPR001650 -
Aed9g1070 748 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 390 547 IPR001650 -
Aed9g1070 748 Gene3D - 270 380 IPR027417 -
Aed9g1070 748 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 283 719 - -
Aed9g1070 748 MobiDBLite consensus disorder prediction 54 81 - -
Aed9g1070 748 Pfam TRCF domain 600 686 IPR005118 GO:0006281
Aed9g1070 748 Gene3D - 152 209 - -
Aed9g1070 748 PANTHER TRANSCRIPTION-REPAIR-COUPLING FACTOR 283 719 - -
Aed9g1070 748 SUPERFAMILY CarD-like 144 211 IPR036101 -
Aed9g1070 748 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 268 372 IPR014001 -
Aed9g1070 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 286 516 IPR027417 -
Aed9g1070 748 SMART TRCF_a_2_a 598 696 IPR005118 GO:0006281
Aed9g1070 748 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 10 283 - -
Aed9g1070 748 SUPERFAMILY TRCF domain-like 594 738 IPR037235 -
Aed9g1070 748 Gene3D - 595 741 IPR037235 -
Aed9g1070 748 Pfam CarD-like/TRCF domain 149 249 IPR003711 -
Aed9g1070 748 SMART helicmild6 419 503 IPR001650 -
Aed9g1070 748 Gene3D - 382 549 IPR027417 -
Aed9g1070 748 PANTHER TRANSCRIPTION-REPAIR-COUPLING FACTOR 10 283 - -
Aed9g1070 748 SMART CarD_TRCF_2 148 250 IPR003711 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed9g1070 Aed-Chr9 7861041 7869585 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed9g1070 - - gmx:100805206 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1070 9 7861041 7869585 Aed9g1070 9 7861041 7869585 ECH